| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3648 |
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| Symbol | |
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| ID | 3911450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4185256 |
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| End bp | 4186509 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885550 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_487254 |
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| Protein GI | 86750758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.581265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG ACGAGACGGA TGTTCTGGTG CTCGGCGCCG GGATCGTGGG CGTCGGCGCC
GCGCTGCATC TGCAGCGACG CGGCCGCGAC GTCGTGCTGG TCGATCGCAA CGCCGCGGCG
GGTGACGAGA CCAGCTACGG CAATGCCGGG CTGATCGAGG TCGCCTCGGT GCTGCCCTAC
ATGTTCCCGC GGGATCTCGG GCATCTGCTG CGCTACGCCT TCAACGGCTC GGCGGACGTG
CACTACCAGT TGTCAGGCCT GCCTGAATTC CTGCCCTGGC TGCTGCGCTA TTTTCAGGCC
TCGTCGCCGG AAGGTGCGGA GCGCACCGCG CGCGCCGCGT TGCCGCTGAT CCGGCAGAGC
CTCGCCGAGC ATGAAGCCCT GATCGCCGAG GCCGGCGTCC CGGAGCTGTT GCGCAAGACC
GGCTGGATCA AGCTGTTTCG CTCCGAGGTC TCGTTCGGCA ACAGCGTGGC CGAGCTCGAC
CGGGTGAAGC GCTTCGGCGT CACCGCCGAT GTGCTCGACG ACGCATCGAT CGCGGCGCGC
GAACCGAACC TGATGGGCAA ATTCGCCGGC GCGATCCATT GGCTCGAGCC CGGCTTCGTG
CCCGATCCCG GCGCGCTGGT GAAGGCCTAT GCGGCATTGT TCACGCGCAA GGGAGGCCGG
TTCGCCCGCG GCGACGCGCG CTCGCTGCAG CAGCAAGGCG GCGGCTGGCG GATCACCGCC
GACGATGGTC CAATCACCGC GCGCGAAGTG GTGGTGGCGC TGGGGCCGTG GTCTGATCTG
GTGTTCAGGC CGCTCGGCTA TCGCATTCCG CTCGGCGTCA AGCGCGGCTA TCACCAGCAT
TTCGCGGCGC GCGGCAACGC GGTGCTGCAG CATCCGGTTC TCGATGCCGA TCGCGGTTAT
TTGCTGGCGC CGATGAAACG CGGCATCCGG CTCACCACCG GCGCCGAGTT CGCCCGCCGC
GACGCGCCGC CGTCGCATGT GCAGATCGAC CGGACCCGTG CGATGGCGCG CGATCTGTTT
CCGCTCGGCG ATGCGGTCGA GCAGCAGCCC TGGATGGGCG CGCGGCCGTG CCTGCCGGAC
ATGCTGCCGG TGATCGGCCG GGCGCCGCGT CACCCGGGGC TGTGGTTCGA TTTCGGTCAT
CAGCATCACG GCCTCACGCT CGGCCCGGTC ACCGGACGGC TGTTGGCCGA GATGATGACC
CGCGAGGAGC CGTTCGCCGA TCCGGTGCCG TTCGCCGCCG AACGATTCGG TTGA
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| Protein sequence | MKQDETDVLV LGAGIVGVGA ALHLQRRGRD VVLVDRNAAA GDETSYGNAG LIEVASVLPY
MFPRDLGHLL RYAFNGSADV HYQLSGLPEF LPWLLRYFQA SSPEGAERTA RAALPLIRQS
LAEHEALIAE AGVPELLRKT GWIKLFRSEV SFGNSVAELD RVKRFGVTAD VLDDASIAAR
EPNLMGKFAG AIHWLEPGFV PDPGALVKAY AALFTRKGGR FARGDARSLQ QQGGGWRITA
DDGPITAREV VVALGPWSDL VFRPLGYRIP LGVKRGYHQH FAARGNAVLQ HPVLDADRGY
LLAPMKRGIR LTTGAEFARR DAPPSHVQID RTRAMARDLF PLGDAVEQQP WMGARPCLPD
MLPVIGRAPR HPGLWFDFGH QHHGLTLGPV TGRLLAEMMT REEPFADPVP FAAERFG
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