Gene RPB_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3643 
Symbol 
ID3911445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4179711 
End bp4180202 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID637885545 
Productphasin 2 
Protein accessionYP_487249 
Protein GI86750753 
COG category 
COG ID 
TIGRFAM ID[TIGR01985] phasin 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.468066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG AAACCTATTC CGAGACGCAT CAGGCCGCGT TCGACAACGT CAAACAGGCA 
TTTGCGCCGG TTGGCGACGC ATTCAAGAAC TTCCAGAATC TGGAAGTTCC GGAAGCCACC
CGCGACTTCG TCAAGCGTGC GGCCGGCACC GCCAAGGAGA AGGCCGCCGA CTTCCAGGCG
GGTTCGGAGA AGGTCACCTC CGCGATCGAA GAGGCTGTCA GCCATTCGGT CAGCGAGGCC
GCCAAGATCA GCCGCAACAT CCAGCAGGCG ATCTATGCCG ACACCCAGGC GTTCTTCTCC
GGAATCGACA AGCTGGCTTC GGCGAAGTCG TTGAACGAAG CGGTGCAGAT CCAGTCGGAT
CTGGTTCGCT CGCACGGCGA AGTGCTGGTG TCGCGCGCCA AGTCGACCAC CGAATATCTC
GGGAAGCTGG TCGCCGACAG CGCCAAGTCG GCCCAGGACA ACCTGAGCAA GAGCTTCAGC
AAGCCGCTCT GA
 
Protein sequence
MTNETYSETH QAAFDNVKQA FAPVGDAFKN FQNLEVPEAT RDFVKRAAGT AKEKAADFQA 
GSEKVTSAIE EAVSHSVSEA AKISRNIQQA IYADTQAFFS GIDKLASAKS LNEAVQIQSD
LVRSHGEVLV SRAKSTTEYL GKLVADSAKS AQDNLSKSFS KPL