Gene RPB_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3640 
SymbolpaaB 
ID3911442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4177339 
End bp4177626 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content67% 
IMG OID637885542 
Productphenylacetate-CoA oxygenase subunit PaaB 
Protein accessionYP_487246 
Protein GI86750750 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3460] Uncharacterized enzyme of phenylacetate metabolism 
TIGRFAM ID[TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.492282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGAATACGGC GCTGTGGGAA GTCTTCATCC GCAGCCGCAA TGGCCTCGCG 
CACAAGCACG TCGGCTCGCT GCACGCCGCC GACGCCACGC TGGCACTGCA GGCGGCCCGC
GACGTCTACA CCCGCCGCGG CGAGGGGCTG TCGATCTGGG TGGTGCCGTC GAGCGCGATC
ACGGCGAGCG ATCCCGCCGA GGCGGGCATG ATGTTCGAGC CGGCCGAGAG CAAGATCTAT
CGTCACCCGA CGTTCTACGA GGTGCCCGAT GAAGTCGGGC ATATGTAG
 
Protein sequence
MSTPNTALWE VFIRSRNGLA HKHVGSLHAA DATLALQAAR DVYTRRGEGL SIWVVPSSAI 
TASDPAEAGM MFEPAESKIY RHPTFYEVPD EVGHM