| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3638 |
|---|
| Symbol | |
|---|
| ID | 3911440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4175887 |
|---|
| End bp | 4176390 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637885540 |
|---|
| Product | phenylacetate-CoA oxygenase, PaaJ subunit |
|---|
| Protein accession | YP_487244 |
|---|
| Protein GI | 86750748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
|---|
| TIGRFAM ID | [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.315458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACGC GCGCCATCAG CGATTCCGAG CTGCGCGCCC GCGCCTGGGA TGCGGCCGCG
ACCGTGGTCG ATCCGGAGAT TCCCGTCCTC ACCATCGCCG ATCTCGGCGT GCTGCGCGAC
ATCAGCGTCA ACGACGGCCG CGTCGAGGTC ACGATCACGC CGACCTATTC GGGCTGCCCG
GCGATGAACA TGATCACGCT GGAGATCGAG ACCGCGCTGG CGCGCGCCGG CATCGGCGAC
GCGAGCGTTC GAACCGTGCT GGCGCCGGCC TGGACCACCG ACTGGATGAG CGCCGAGGGC
CGCGCCAAGC TGAAGGACTA TGGCATCGCG CCGCCGCAGG CCGCGACCGG CCGCCGGGCG
TTGTTCGGCG CCCTTGAAAT AGCCTGTCCG CAATGCGGTT CGATCGACAC CGAGCAACTG
TCCGAATTCG GCTCGACCTC CTGCAAGGCG CTGTGGCGCT GCAAGGTGTG CCGCGAGCCG
TTCGATTACT TCAAATGTCA CTGA
|
|---|
| Protein sequence | MVTRAISDSE LRARAWDAAA TVVDPEIPVL TIADLGVLRD ISVNDGRVEV TITPTYSGCP
AMNMITLEIE TALARAGIGD ASVRTVLAPA WTTDWMSAEG RAKLKDYGIA PPQAATGRRA
LFGALEIACP QCGSIDTEQL SEFGSTSCKA LWRCKVCREP FDYFKCH
|
|---|
| |