| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3629 |
|---|
| Symbol | |
|---|
| ID | 3911431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4165521 |
|---|
| End bp | 4166954 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637885531 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_487235 |
|---|
| Protein GI | 86750739 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.848783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAC ACCACGAGCT GATTCAAGCG ACGGCCTGCA AGATCGTCGA CCAACTCCGA
ACCGGCGAGG TCACGCCGCT CGATCTGCTC GACGCGCTGG AGCAGCGGAT CGCCGAGGTC
GACGGCGCCG TCAACGCGCT GCCGACGCTG TGCTTCGATC GCGCCCGCGC CCGTGCCGCC
GACCTGATGA AGAAGCCGCA GTCCGAACGC GGCCTGCTCG CCGGCCTTCC GGTGCCGATC
AAGGACCTCA CCGCGGTCGA AGGCGTGCGG ACGACCCAGG GGTCGCCGAT CTTCAAGGAC
CATGTCCCTA CCCGCTCCGA CCTGATGGTC GAGCACCTCG AAGCCAGTGG CGGGGTGGTC
TACGCCAAAT CCAACACCCC GGAATTCGGC GCCGGCGCCA ACACCTTCAA CGAGGTGTTC
GGGGCGACGC GCAATCCGTG GGATTTGTCG CGCTCGGCGG CAGGCTCGTC CGGCGGCGCT
GCGGCCGCGC TCGCCAGCGG CACCGCGTGG CTCGCCCACG GCTCGGACAT GGGCGGCTCG
CTGCGCAATC CGGCGAGCTT CTGCGGCGTC GTCGGCCTGC GGCCGAGCTT CGGCCGTGTC
GCGCACACGC CCGCAGCAGC GATCGACCGC AATCTCGGCG TGCAGGGCCC GATGGCGCGC
AATGTCGAGG ACGTCGCCCT GTTGCTCGAC GCGATGAGCG GCGAACACGC CGCCGATCCG
CTGTCGCTGC CCTCGCCGGT AACCTCGTTC CTCGCCGCCG CGCGCGCGCG CACCAAGCCG
CTGCGCGTGG CTTATTCGCC CGACCTCGGC ATCACCCCGG TCGATCCCGA GGTCGCCGCG
ATCACCCGCA AGGCGGCCGA GCGCTTCGCC GAATCCGGCG TGGTCGTAGA GCAGGCTCAG
CCCGACCTCT CTGAAGCGCA CGAATGCTTC CACGTGCTGC GCGCATTCGA CTTCGCGATC
AGCAAGGCGG AACTGCTCCG CACCAAGCGT GATCTGCTGA AGCCGGAGGT GATCTGGAAC
ATCGAGCAGG GGCTCGCGCT CAGCGTCGAC GATCTGGCCC GGGCCGAGGC GCAGCGCGTG
GCGATGGCCG CACGCACCAT CGCGTTCTTC GAGACTTACG ATCTGCTGCT GTGTCCGGCG
ACGATCACCG CGCCTTTCCC CGTGGAGCAG CGCTACCTCG CAGAATGCAA CGGCCACACC
TTCGACAACT ACGTCGAGTG GCTCGGCATC GTCTACGCGA TCACGCTGGT CTGCTGCCCG
GCGCTGTCGC TGCCCTGCGG CTTCACGTCG GCCGGCCTGC CGGTCGGGCT GCAGATGATT
GCTCGGCCGC GCAACGAGGC CGGCCTGCTC GCCGGCGCCG CATTGCTCGA AGACGTTCTC
GGCCTGCGCG GCACCACGCC GATCGATCCG CGGCCCGCGC CAGCGAGCCT CTGA
|
|---|
| Protein sequence | MAAHHELIQA TACKIVDQLR TGEVTPLDLL DALEQRIAEV DGAVNALPTL CFDRARARAA
DLMKKPQSER GLLAGLPVPI KDLTAVEGVR TTQGSPIFKD HVPTRSDLMV EHLEASGGVV
YAKSNTPEFG AGANTFNEVF GATRNPWDLS RSAAGSSGGA AAALASGTAW LAHGSDMGGS
LRNPASFCGV VGLRPSFGRV AHTPAAAIDR NLGVQGPMAR NVEDVALLLD AMSGEHAADP
LSLPSPVTSF LAAARARTKP LRVAYSPDLG ITPVDPEVAA ITRKAAERFA ESGVVVEQAQ
PDLSEAHECF HVLRAFDFAI SKAELLRTKR DLLKPEVIWN IEQGLALSVD DLARAEAQRV
AMAARTIAFF ETYDLLLCPA TITAPFPVEQ RYLAECNGHT FDNYVEWLGI VYAITLVCCP
ALSLPCGFTS AGLPVGLQMI ARPRNEAGLL AGAALLEDVL GLRGTTPIDP RPAPASL
|
|---|
| |