| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3626 |
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| Symbol | |
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| ID | 3911428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4161511 |
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| End bp | 4162596 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885528 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_487232 |
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| Protein GI | 86750736 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.363906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCAGA ACATGAAGAA GGACGAATAC CGGATCGCCG TCATCCCCGG CGACGGCATC
GGCAAGGAGG TGATGCCGGA AGGGCTTCGT GCGCTCGAAG CCGCCGCGAA GAAGCATCGC
GTCAAGCTGA GATTCGATCA TTTCGACTTC GCCAGCTATG ACTATTATGA AAAGCACGGC
CAGATGATGC CGGACGATTG GAAGAATCTG ATCGGCGGCC ACGACGCGAT CTTCTTCGGC
GCGGTGGGCT GGCCGCAGAA GATCCCGGAC CACATCTCGC TGTGGGGGTC GCTGATCAAG
TTCCGTCGCG AGTTCGATCA ATACGTCAAT CTGCGCCCGG TGCGGCTGAT GCCTGGCGTG
CCGTCGCCGC TCGCCGGGCG CAAGCCGGGC GATATCGATT TCTGGGTGGT GCGCGAGAAC
ACCGAGGGGG AATATTCATC GGTCGGCGGC CGGATGTTTC CCGACACCGA CCGCGAATTC
GTCACCCAGC AGACGGTGAT GACGCGGACC GGTGTCGACC GCATCCTGAA ATTCGCCTTC
GACCTCGCGC AATCGCGGCC GAAGCGGCAT CTGACGTCGG CGACCAAGTC GAACGGCATC
TCGATCACCA TGCCGTATTG GGACGAGCGG GTCGAGGCGA TGGCGAAGGC CTATCCCGAC
GTGACGTGGG ACAAGTATCA CATCGATATC CTCACCGCGC ATTTCGTGCT GCATCCGGAC
TGGTTCGACG TCGTCGTCGG CTCCAACCTG TTCGGCGACA TCCTGTCCGA TCTCGGCCCG
GCCTGTACCG GCACGATCGG TATTGCGCCG TCGGGCAACA TCAATCCGGA CGGCGATTTC
CCGAGCGTGT TCGAGCCGGT GCACGGCTCG GCGCCGGACA TTGCGGGGCA GGGCATCGCC
AATCCGATCG GGATGATCTG GTCGGGCGCG ATGATGCTCG AACACCTCGG TGAGAAGACC
GCTGCGGATT CGATCGTCAA GGCGATCGAG CGGACGCTGG CGGAGGGCAC GCTGCGCACG
CGTGATCTCG GTGGTCAGGC CGACACGACG GCTTGCGGCA AAGCTGTGGC GGAAATGGTG
GAGTAG
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| Protein sequence | MDQNMKKDEY RIAVIPGDGI GKEVMPEGLR ALEAAAKKHR VKLRFDHFDF ASYDYYEKHG
QMMPDDWKNL IGGHDAIFFG AVGWPQKIPD HISLWGSLIK FRREFDQYVN LRPVRLMPGV
PSPLAGRKPG DIDFWVVREN TEGEYSSVGG RMFPDTDREF VTQQTVMTRT GVDRILKFAF
DLAQSRPKRH LTSATKSNGI SITMPYWDER VEAMAKAYPD VTWDKYHIDI LTAHFVLHPD
WFDVVVGSNL FGDILSDLGP ACTGTIGIAP SGNINPDGDF PSVFEPVHGS APDIAGQGIA
NPIGMIWSGA MMLEHLGEKT AADSIVKAIE RTLAEGTLRT RDLGGQADTT ACGKAVAEMV
E
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