Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3618 |
Symbol | |
ID | 3911420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4153100 |
End bp | 4154086 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885520 |
Product | inner-membrane translocator |
Protein accession | YP_487224 |
Protein GI | 86750728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.466346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.345258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAGG CTCATCTCAA GCGCCGCCGC CGCGATCTCA TCGTCGCCAC CGTGCTCGCC TGTATCGCGG CGCTGGTGCC GCTGTTCGTC AAGGACGTCT ACGTCCAGAA CATCATGGTC TTGACCTTGA TGTACGCAGC GCTGTCGCAG GCCTGGAACA TCCTCGGCGG CTATTGCGGC CAGATCTCGC TGGGCCATGC GCTGTATTTC GGGCTCGGGG CCTATACGAC CGCGCTGCTG TTCACCAAGT TCGGCGTGCT GCCGTGGTTC GGGATGCTCG GTGGTGGCCT GATCTCGGCG GCGATCGCGC TGGCGCTCGG CTATCCGACC TTCCGGCTGC GCGGGCATTA TTTCGTCATC GCCACCATCG TGATCGCCGA AATCGGCTTC CTGCTGTTCC ACAATTGGGA CTGGGCGGGC GCCGCGCTCG GCATCGACAT CCCGGTGCGC GGCGACAGTT GGGCCAAATT CCAGTTCACC CGCAGCAAAC TGCCTTATTA CTACTTCGCC CTGGTGTTCT GCTGCGTCGC CTGGCTGGTG ACGTGGTGGC TGGAGAATTC GAAATGGGGC TATTGGTGGC GCGCCGTGAA GGACAATCCC GAGGCTGCTG AAAGCCTCGG CGTGGTGGTA TTCAACTCCA AGATGGGCGC TGCCGCGGTG TCGGCGTTCC TCACCGCGAT CGGCGGCGCG TTCTACGCGA TGTTCGTGTC CTACATCGAC CCGGAAAGCG TGATGACCTT CCAGTTCTCG CTGCTGATGG CGCTGCCCGC GGTGCTGGGC GGCATCGGCA CGCTGTGGGG GCCGGTGCTC GGCGCAGTGA TCCTGATCCC GCTCACCGAA CTGACTCGCT CCTTCGTCGG CGGCTCCGGC CGCGGCGTCG ATCTGATCCT CTACGGCACC GTGATCGTGC TGATTTCGCT GGCGCGCCCC GAAGGCCTGA TCGGATTGTT CTCGCGGCGA CCTGCCTCGA AGGGAGTGCC GCAATGA
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Protein sequence | MDEAHLKRRR RDLIVATVLA CIAALVPLFV KDVYVQNIMV LTLMYAALSQ AWNILGGYCG QISLGHALYF GLGAYTTALL FTKFGVLPWF GMLGGGLISA AIALALGYPT FRLRGHYFVI ATIVIAEIGF LLFHNWDWAG AALGIDIPVR GDSWAKFQFT RSKLPYYYFA LVFCCVAWLV TWWLENSKWG YWWRAVKDNP EAAESLGVVV FNSKMGAAAV SAFLTAIGGA FYAMFVSYID PESVMTFQFS LLMALPAVLG GIGTLWGPVL GAVILIPLTE LTRSFVGGSG RGVDLILYGT VIVLISLARP EGLIGLFSRR PASKGVPQ
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