| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3618 |
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| Symbol | |
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| ID | 3911420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4153100 |
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| End bp | 4154086 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885520 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_487224 |
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| Protein GI | 86750728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.466346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.345258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGG CTCATCTCAA GCGCCGCCGC CGCGATCTCA TCGTCGCCAC CGTGCTCGCC
TGTATCGCGG CGCTGGTGCC GCTGTTCGTC AAGGACGTCT ACGTCCAGAA CATCATGGTC
TTGACCTTGA TGTACGCAGC GCTGTCGCAG GCCTGGAACA TCCTCGGCGG CTATTGCGGC
CAGATCTCGC TGGGCCATGC GCTGTATTTC GGGCTCGGGG CCTATACGAC CGCGCTGCTG
TTCACCAAGT TCGGCGTGCT GCCGTGGTTC GGGATGCTCG GTGGTGGCCT GATCTCGGCG
GCGATCGCGC TGGCGCTCGG CTATCCGACC TTCCGGCTGC GCGGGCATTA TTTCGTCATC
GCCACCATCG TGATCGCCGA AATCGGCTTC CTGCTGTTCC ACAATTGGGA CTGGGCGGGC
GCCGCGCTCG GCATCGACAT CCCGGTGCGC GGCGACAGTT GGGCCAAATT CCAGTTCACC
CGCAGCAAAC TGCCTTATTA CTACTTCGCC CTGGTGTTCT GCTGCGTCGC CTGGCTGGTG
ACGTGGTGGC TGGAGAATTC GAAATGGGGC TATTGGTGGC GCGCCGTGAA GGACAATCCC
GAGGCTGCTG AAAGCCTCGG CGTGGTGGTA TTCAACTCCA AGATGGGCGC TGCCGCGGTG
TCGGCGTTCC TCACCGCGAT CGGCGGCGCG TTCTACGCGA TGTTCGTGTC CTACATCGAC
CCGGAAAGCG TGATGACCTT CCAGTTCTCG CTGCTGATGG CGCTGCCCGC GGTGCTGGGC
GGCATCGGCA CGCTGTGGGG GCCGGTGCTC GGCGCAGTGA TCCTGATCCC GCTCACCGAA
CTGACTCGCT CCTTCGTCGG CGGCTCCGGC CGCGGCGTCG ATCTGATCCT CTACGGCACC
GTGATCGTGC TGATTTCGCT GGCGCGCCCC GAAGGCCTGA TCGGATTGTT CTCGCGGCGA
CCTGCCTCGA AGGGAGTGCC GCAATGA
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| Protein sequence | MDEAHLKRRR RDLIVATVLA CIAALVPLFV KDVYVQNIMV LTLMYAALSQ AWNILGGYCG
QISLGHALYF GLGAYTTALL FTKFGVLPWF GMLGGGLISA AIALALGYPT FRLRGHYFVI
ATIVIAEIGF LLFHNWDWAG AALGIDIPVR GDSWAKFQFT RSKLPYYYFA LVFCCVAWLV
TWWLENSKWG YWWRAVKDNP EAAESLGVVV FNSKMGAAAV SAFLTAIGGA FYAMFVSYID
PESVMTFQFS LLMALPAVLG GIGTLWGPVL GAVILIPLTE LTRSFVGGSG RGVDLILYGT
VIVLISLARP EGLIGLFSRR PASKGVPQ
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