Gene RPB_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3617 
Symbol 
ID3911419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4152369 
End bp4153103 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID637885519 
ProductABC transporter related 
Protein accessionYP_487223 
Protein GI86750727 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.509048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.533217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC CACTGCTCGA GACCCGCGGC GTCTGGCAGC GTTTCGGCGG CCTGATCGCC 
AACAGCGACG TGTCGATCTC GGTCGACCGC GGCGAGATCG TCGGGCTGAT CGGACCTAAC
GGCGCCGGCA AGTCGACGCT GTTCAATCTG ATCGCCGGCG TGCTGCCGCC GACGCAAGGT
TCGATCATCT TCGATGGCGA GGACGTCACG AAGCTTCCGG CCACGGCGCG CTGCGCGCGC
GGCATCGCCC GCACCTTCCA GGTGGTGAAG AGCTTCGAAT CCATGACGGT GATCGACAAT
GTCATCGTCG GCGCGCTGAT CCGCACCACG GTGATGCGCG AGGCGCGGCG CAAAGCGCAC
GAGGTGCTGG CGTTCTGCGG GCTGGATGCG CGCGCGGATG TGCTCGCGAA CCAGCTGATC
CCTTCGGAGA AGCGCCGGCT CGAAGTGGCC CGCGCGCTCG CCACCGAGCC GAAGCTGCTG
CTGCTCGACG AGGTGTTGAC CGGGTTGACG CCGACCGAAG CGCAGACCGG CGTCGAATTG
GTCCGGCGGG TCCGCGACAC CGGCGTCACA GTGCTGATGG TCGAACATGT CATGGAGATC
GTGATGCCGC TGGTCGATCG CGCCATCGTG CTGGATCTCG GCAAGGTGCT GGTCGAGGGC
AAGCCGGCCG ACGTCGTGCG CGATCCGAAA GTCATCACCG CCTATCTCGG GGATCGCCAT
GCTGTCAGTG CGTGA
 
Protein sequence
MTAPLLETRG VWQRFGGLIA NSDVSISVDR GEIVGLIGPN GAGKSTLFNL IAGVLPPTQG 
SIIFDGEDVT KLPATARCAR GIARTFQVVK SFESMTVIDN VIVGALIRTT VMREARRKAH
EVLAFCGLDA RADVLANQLI PSEKRRLEVA RALATEPKLL LLDEVLTGLT PTEAQTGVEL
VRRVRDTGVT VLMVEHVMEI VMPLVDRAIV LDLGKVLVEG KPADVVRDPK VITAYLGDRH
AVSA