Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3617 |
Symbol | |
ID | 3911419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4152369 |
End bp | 4153103 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885519 |
Product | ABC transporter related |
Protein accession | YP_487223 |
Protein GI | 86750727 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.509048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.533217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC CACTGCTCGA GACCCGCGGC GTCTGGCAGC GTTTCGGCGG CCTGATCGCC AACAGCGACG TGTCGATCTC GGTCGACCGC GGCGAGATCG TCGGGCTGAT CGGACCTAAC GGCGCCGGCA AGTCGACGCT GTTCAATCTG ATCGCCGGCG TGCTGCCGCC GACGCAAGGT TCGATCATCT TCGATGGCGA GGACGTCACG AAGCTTCCGG CCACGGCGCG CTGCGCGCGC GGCATCGCCC GCACCTTCCA GGTGGTGAAG AGCTTCGAAT CCATGACGGT GATCGACAAT GTCATCGTCG GCGCGCTGAT CCGCACCACG GTGATGCGCG AGGCGCGGCG CAAAGCGCAC GAGGTGCTGG CGTTCTGCGG GCTGGATGCG CGCGCGGATG TGCTCGCGAA CCAGCTGATC CCTTCGGAGA AGCGCCGGCT CGAAGTGGCC CGCGCGCTCG CCACCGAGCC GAAGCTGCTG CTGCTCGACG AGGTGTTGAC CGGGTTGACG CCGACCGAAG CGCAGACCGG CGTCGAATTG GTCCGGCGGG TCCGCGACAC CGGCGTCACA GTGCTGATGG TCGAACATGT CATGGAGATC GTGATGCCGC TGGTCGATCG CGCCATCGTG CTGGATCTCG GCAAGGTGCT GGTCGAGGGC AAGCCGGCCG ACGTCGTGCG CGATCCGAAA GTCATCACCG CCTATCTCGG GGATCGCCAT GCTGTCAGTG CGTGA
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Protein sequence | MTAPLLETRG VWQRFGGLIA NSDVSISVDR GEIVGLIGPN GAGKSTLFNL IAGVLPPTQG SIIFDGEDVT KLPATARCAR GIARTFQVVK SFESMTVIDN VIVGALIRTT VMREARRKAH EVLAFCGLDA RADVLANQLI PSEKRRLEVA RALATEPKLL LLDEVLTGLT PTEAQTGVEL VRRVRDTGVT VLMVEHVMEI VMPLVDRAIV LDLGKVLVEG KPADVVRDPK VITAYLGDRH AVSA
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