| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3599 |
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| Symbol | |
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| ID | 3911401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4129228 |
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| End bp | 4130100 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885501 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_487205 |
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| Protein GI | 86750709 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.55778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.875827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCCG ATCAGCTTCT CGCAGGCCGT CGTATCCTCG TCACCGGTGG CGGCACCGGG
CTCGGCAAAT CGATGGCCGC GCGCTTCCTG CAGCTCGGCG CCGAAGTCCA TATCTGCGGC
CGCCGCAAGG GCGTCTGCGA CGAGACCGCG ACCGAACTGA TGGATCAGTA CGGCGGCAAG
GTGATGACCT ACGGCGTCGA CATCCGCGAC TCGGCCGCGG TCGACCACAT GGTCGAGACC
ATCTTCGCCG ACGGCCCGCT CACCGATCTG ATCAACAACG CCGCCGGAAA TTTCATCTCG
CGGACGGAAG AGCTGTCGCC GCGCGGCTTT GACGCCGTCG CCAACATCGT GATGCACGGC
ACCTTCTACG TGACGCATGC GGTCGGCCGG CGCTGGATCG CCGGCGGCCA CCGCGGCAAT
GTGGTGTCGA TCACCACCAC CTGGGTCCGC AACGGCAGCC CCTATGTGGT GCCCTCGGCG
ATGAGCAAAT CGGCGATCCA CGCCATGACG ATGTCGCTCG CCACCGAATG GGGCCGCTAC
GGCATCCGCC TCAACACCAT TGCGCCCGGC GAAATTCCCA CCGAAGGCAT GAGCAAGCGG
ATCAAGCCCG GCGACGAGGC CGGCGCCCGC ACCGTGAAGG TGAATCCGAT GGGCCGCGTC
GGCACCATGG AGGAACTGCA GAACGTCGCG GTGTTCCTGA TCTCCGGCGG CTGCGACTGG
ATCAACGGCG AAACCATCGC GATGGACGGC GCCCAGGGCC TGGCGATGGG CGGCAATTTC
TATCAGCTGC GCGACTGGAG CAACGCCGAC TGGGACCAGG CCAAGGCCTC GATCAAGGCG
CAGAACGAAA AAGACCGCGC ACAGCGGGGG TGA
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| Protein sequence | MFSDQLLAGR RILVTGGGTG LGKSMAARFL QLGAEVHICG RRKGVCDETA TELMDQYGGK
VMTYGVDIRD SAAVDHMVET IFADGPLTDL INNAAGNFIS RTEELSPRGF DAVANIVMHG
TFYVTHAVGR RWIAGGHRGN VVSITTTWVR NGSPYVVPSA MSKSAIHAMT MSLATEWGRY
GIRLNTIAPG EIPTEGMSKR IKPGDEAGAR TVKVNPMGRV GTMEELQNVA VFLISGGCDW
INGETIAMDG AQGLAMGGNF YQLRDWSNAD WDQAKASIKA QNEKDRAQRG
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