| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3589 |
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| Symbol | |
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| ID | 3911391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4113768 |
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| End bp | 4114682 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885491 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_487195 |
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| Protein GI | 86750699 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.336775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.435247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG CACTCGACGG CAAAGTCATC ATCGTCACCG GCGCGGGGCG CGGCATTGGG
CGCGAGATCG CGCTGCTCGC GGCGCGCGAG GGCGCCAAGG TCGTCGTCAA CGATCCGGGC
GTCGCCGCCG ACGGCTCGGG CACTGACGCC TCGCCGGCCG AGCAGGTGGT CGAGGAGATC
AAGAAGGAAG GCGGCATCGC GGTCGCCAAT TTCGAAAGCG TGGCGGAAGC CGTGCCGGCC
AGCAAGATCG TCAAGCAGGC GGTCGACACC TGGGGCAAGC TCGACGGCGT CGTCAACAAT
GCCGGCATCC TGCGCGACGC GATCTTCCAT CGCATGAGCA TCGACGCCTT CGAGCAGGTC
ATCAAGGTGC ATCTGATGGG CTCGTTCTAC GTGTCGCACG CTGCCGCGCG CTTGTTCCGC
GAGCAGGAGA GCGGGTCGTT CGTGCACTTC ACCTCGACCT CGGGGCTGAT CGGCAATTTC
GGCCAGGCCA ACTACGCCGC CGCCAAGCTC GGCATCGTCG GCCTGTCGAA GTCGATCGCG
CTCGACATGC AGCGCTTCAA CGTCCGCTCC AATTGCGTGT CGCCGTTCGC CTGGTCGCGG
CTGATCGGCA CCATCCCGAC CGAGACCGAA GCCGAAAAGG CGCGCGTCGC GCGGATGCAG
CAGATGGGCC CGGAGAAGAT CGCGCCGCTG TCGGTGTTCC TGCTCGGCGA TGCGGCGAAG
GACGTCACCG GCCAGATCTT CGCGGTGCGG ATGAACGAGA TCTTCCTGAT GGGCCAGTCG
CGCCCGATCC GCTCGGTGCA CCGCGACGGC GGCTGGACCT GCGAGACGCT GGCCGAGCAC
GGCATGCCGG CGCTGAAAGG TTCGTTCTAC AAGCTCGACC GCTCCGCCGA CATCTTCAAC
TGGGACGCGA TCTGA
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| Protein sequence | MAKALDGKVI IVTGAGRGIG REIALLAARE GAKVVVNDPG VAADGSGTDA SPAEQVVEEI
KKEGGIAVAN FESVAEAVPA SKIVKQAVDT WGKLDGVVNN AGILRDAIFH RMSIDAFEQV
IKVHLMGSFY VSHAAARLFR EQESGSFVHF TSTSGLIGNF GQANYAAAKL GIVGLSKSIA
LDMQRFNVRS NCVSPFAWSR LIGTIPTETE AEKARVARMQ QMGPEKIAPL SVFLLGDAAK
DVTGQIFAVR MNEIFLMGQS RPIRSVHRDG GWTCETLAEH GMPALKGSFY KLDRSADIFN
WDAI
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