| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3586 |
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| Symbol | |
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| ID | 3911388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4110253 |
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| End bp | 4111602 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885488 |
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| Product | amidase |
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| Protein accession | YP_487192 |
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| Protein GI | 86750696 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.482316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT TGCCCACGCT CGCAGTCCTC GCCGCCGATC TCGACGCCGG CCGCACCACC
GCGCGCAAAC TGGTCGACGA TTGCCTGGCG CGGATCGACG ACGCGGCGGG CGAGGGCGCG
CGCGCCTTCA TTCATGTCGA TCGCGATGCG GCGCGCGAAG CCGCCGAGGC GATGGACAAG
CTGCGCGCGA TCAAGGCGGC GCCGTCGCCC TATGCCGGCA TTCCGGTTTC GATCAAGGAC
CTGTTCGATA TCAGGGGCCA GGTCACCCGC GCCGGCTCGC GCGCGCTCGA CGACAATCCG
CCGGCGGAGG ACGACGCCCC CGCGGTGGCG CGGCTGCGGC GCGCCGGCTT CGTGGTGATC
GGCCGCACCA ACATGACCGA GTTCGCCTAT TCCGGCATCG GCATCAATCC GCATTACGGC
ACGCCGAAAT CGGCCTATGG CCGCGACGTC GGCTACGTGC CGGGCGGCTC GTCCTCGGGC
GCGGCGGTGT CGGTCGCCGA CGGCATGGCG CATGCCGGGC TCGGCACCGA CACCGGCGGC
TCGTGCCGGA TTCCGGCGGC GTTCAACGGC ATCGTCGGCT ACAAGCCGTC GCAGCAACGC
GTGCCGCGCG ACGGCGCGGT GCCGCTGTCG TTCTCGCTGG ATTCGATCGG GCCGCTGGCG
CGCAGCGTCG CCTGCTGCGC GGTGCTCGAC GCCGTGCTCG CCGACGAAGA GATCGTGCCG
CTGGCGCCGC GGCCACTGAA GGGGCTGCGG CTGGCGGTGC CGACCACGGT GGCGCTCGAC
GAACTCGATG AAGCGGTGAG ACTCGCGTTC GAGCGCGCGC TGAAGGCGCT GGCCGGCCAC
GGCGCGATCA TCGAGAAGAT CGAGGTGCCG GAATTCAACG ACGTGGCACC CCTCAGCGCC
AAAGGCGGCC TCACCGCGGC GGAGAGCTAC GCCTGGCATC GCTATCTGAT CGTGGCGCAA
GGCGACGTCT ACGACCCGCG GGTGCGCGAG CGCATCCTGC GCGGCGAGAG CCAGAGCGCC
GCGGACTATG TCGACACCAT CACGGCGCGC AAATCGCTGA TCGCGCGCGC CACCACGCGG
CTCGCGCCCT ACGATGCAGT GGTGATGCCG ACCACGGCCA ACACGCCGCC GGCCATCGCC
GACCTCGCCG ACGACAAGGC GTTCACCAAG GCCAATCTGC TGGCGTTGCG CAATTGCACG
CTCATCAACA TGATCGACGG CTGCGCGATC TCGCTGCCGT GCCATCAGGA CGGCGAAGCG
CCGGTCGGGC TGATGGTGGC CGGCGTCAAC GGCGCCGATC GCGACGTTTT CGAAGTGGCG
GCGGGCGTGG AGGCGGTGCT TCGTGGTTGA
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| Protein sequence | MTKLPTLAVL AADLDAGRTT ARKLVDDCLA RIDDAAGEGA RAFIHVDRDA AREAAEAMDK
LRAIKAAPSP YAGIPVSIKD LFDIRGQVTR AGSRALDDNP PAEDDAPAVA RLRRAGFVVI
GRTNMTEFAY SGIGINPHYG TPKSAYGRDV GYVPGGSSSG AAVSVADGMA HAGLGTDTGG
SCRIPAAFNG IVGYKPSQQR VPRDGAVPLS FSLDSIGPLA RSVACCAVLD AVLADEEIVP
LAPRPLKGLR LAVPTTVALD ELDEAVRLAF ERALKALAGH GAIIEKIEVP EFNDVAPLSA
KGGLTAAESY AWHRYLIVAQ GDVYDPRVRE RILRGESQSA ADYVDTITAR KSLIARATTR
LAPYDAVVMP TTANTPPAIA DLADDKAFTK ANLLALRNCT LINMIDGCAI SLPCHQDGEA
PVGLMVAGVN GADRDVFEVA AGVEAVLRG
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