Gene RPB_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3585 
Symbol 
ID3911387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4109574 
End bp4110260 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID637885487 
Producthypothetical protein 
Protein accessionYP_487191 
Protein GI86750695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.431849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGATC TGTCGTTCAT CCTCGACGCG CAGGGCGCGC GCACGCCGCT GACGCTGCCG 
ATCTCGCAGG CCGTGATCGC CGGCTGGACC GGGCGCGATC CGGTGGCGCG CGACAAGCAC
ATCGTCGAAC TCGAAGCGCT GGGCATCGCG CGGCCGGCGT CAACGCCGAT CTATTATCGC
GTCGCGGCGT CGCGCCTCAC CATGGCGACG TCGATCGAAG TCTCGGGAGG CGATTCGTCC
GGTGAGGTCG AGTTCGTGCT GATCGGCCAT GCCGGCCGTA TCCTGGTCGG CGTCGGCTCC
GACCACACCG ACCGCAAAGT CGAGGCCTAT GGCGTCACGG TGTCGAAGCA GATGTGCGAC
AAGCCGATCG CACCGGAGCT GTGGGACTTC AGCGAAGTCG AAGCGCATTG GGACCGGATC
GTGCTGCGCT CGTTCGCCAC CATCGGTGGC GTGCGCGTGC TGTATCAGGA GGGCACGCTC
GACCACATGC TGCCGGCGCG CGAACTGATG TCGCGCGGGT TCGGCGCGGG CGGACTGCCG
GACGGCTGCG CGCTGTTCGG CGGCACCTTC GCGGCCAAAG GCGGCATCCG CCCGGCGACC
CGGTTCGAGT TCGAGATCGA CGATCCGGTG CTGGGGCGCG TCATTCGTCA CGGTTACGAT
GTGATCGAGC TGCCGATTTT GGGGTGA
 
Protein sequence
MVDLSFILDA QGARTPLTLP ISQAVIAGWT GRDPVARDKH IVELEALGIA RPASTPIYYR 
VAASRLTMAT SIEVSGGDSS GEVEFVLIGH AGRILVGVGS DHTDRKVEAY GVTVSKQMCD
KPIAPELWDF SEVEAHWDRI VLRSFATIGG VRVLYQEGTL DHMLPARELM SRGFGAGGLP
DGCALFGGTF AAKGGIRPAT RFEFEIDDPV LGRVIRHGYD VIELPILG