Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3585 |
Symbol | |
ID | 3911387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4109574 |
End bp | 4110260 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885487 |
Product | hypothetical protein |
Protein accession | YP_487191 |
Protein GI | 86750695 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.431849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTGATC TGTCGTTCAT CCTCGACGCG CAGGGCGCGC GCACGCCGCT GACGCTGCCG ATCTCGCAGG CCGTGATCGC CGGCTGGACC GGGCGCGATC CGGTGGCGCG CGACAAGCAC ATCGTCGAAC TCGAAGCGCT GGGCATCGCG CGGCCGGCGT CAACGCCGAT CTATTATCGC GTCGCGGCGT CGCGCCTCAC CATGGCGACG TCGATCGAAG TCTCGGGAGG CGATTCGTCC GGTGAGGTCG AGTTCGTGCT GATCGGCCAT GCCGGCCGTA TCCTGGTCGG CGTCGGCTCC GACCACACCG ACCGCAAAGT CGAGGCCTAT GGCGTCACGG TGTCGAAGCA GATGTGCGAC AAGCCGATCG CACCGGAGCT GTGGGACTTC AGCGAAGTCG AAGCGCATTG GGACCGGATC GTGCTGCGCT CGTTCGCCAC CATCGGTGGC GTGCGCGTGC TGTATCAGGA GGGCACGCTC GACCACATGC TGCCGGCGCG CGAACTGATG TCGCGCGGGT TCGGCGCGGG CGGACTGCCG GACGGCTGCG CGCTGTTCGG CGGCACCTTC GCGGCCAAAG GCGGCATCCG CCCGGCGACC CGGTTCGAGT TCGAGATCGA CGATCCGGTG CTGGGGCGCG TCATTCGTCA CGGTTACGAT GTGATCGAGC TGCCGATTTT GGGGTGA
|
Protein sequence | MVDLSFILDA QGARTPLTLP ISQAVIAGWT GRDPVARDKH IVELEALGIA RPASTPIYYR VAASRLTMAT SIEVSGGDSS GEVEFVLIGH AGRILVGVGS DHTDRKVEAY GVTVSKQMCD KPIAPELWDF SEVEAHWDRI VLRSFATIGG VRVLYQEGTL DHMLPARELM SRGFGAGGLP DGCALFGGTF AAKGGIRPAT RFEFEIDDPV LGRVIRHGYD VIELPILG
|
| |