Gene RPB_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3584 
Symbol 
ID3911386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4108976 
End bp4109413 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content70% 
IMG OID637885486 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_487190 
Protein GI86750694 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.506828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.421293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CCGACCACAC CGAAACGCCC GACATCCCCG CGGGCTTCAC CCGCCACACC 
CGGCCGAGCC CCCTCACCGC GCCGTGGGAG CCGCTCTATG CGAGGACCAC GGTGGATGCG
GTGATGCTCG GCCTGCGCAT CCGCGACGCC CACACCAATT CGCGCGGCCT CGCCCATGGC
GGACTGATCG CCGCGCTCGC TGACGCCGCG ATGGGCTACA GCTGCGCGCT CAAGCTCGGC
GGCGGCGAGC GGCTGCTCAC CGCCTCGCTG GCGATCGACT TCCTCGGCTC GGCGAAGATC
GGGCAATGGC TGCAGATCGA GCCCGAGGTG GTCAAGCTCG GTGGGTCGCT GTGCGTGGTG
CAGTGCTTCG TCATCGCCGA CGGCGCCCGC TGCGCTCGCG CCAACGCCAC CTTCAGCGTC
GCGAAGGCGA AGGTCTAG
 
Protein sequence
MTESDHTETP DIPAGFTRHT RPSPLTAPWE PLYARTTVDA VMLGLRIRDA HTNSRGLAHG 
GLIAALADAA MGYSCALKLG GGERLLTASL AIDFLGSAKI GQWLQIEPEV VKLGGSLCVV
QCFVIADGAR CARANATFSV AKAKV