| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3582 |
|---|
| Symbol | |
|---|
| ID | 3911384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4106343 |
|---|
| End bp | 4107368 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637885484 |
|---|
| Product | TRAP dicarboxylate transporter DctP subunit |
|---|
| Protein accession | YP_487188 |
|---|
| Protein GI | 86750692 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0176642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.290109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGA CGATGCTCGC GCTGCTGCTC GCAGCCAGCA TGACGCCTGC GGTTGTATCC
GCCGCCTCGG CGCAGGACAA AACCGTCAAC TGGAAGGTCT CGTTGTGGGT GCCGCCGGCG
CATCCGCTGG TTCCGGCGAC CAAGGAATGG GCCGCCGACA TTGAGAAGGC CTCGGGCGGC
ACCATCAAGA TGGCCGTCTT CCCCTCCGAA CAGCTCGGCA AGGCGTTCGA CCATTACGAC
ATGGCGCGCG ACGGCATCGC CGACGTCACC TATGTGAACC CCGGCTATCA GCCCGGCCGC
TTCCCGATCG TCTCCGCCGG CCAACTGCCG TTCCTGTTCA AGGACGGCAA GAAGGGCACG
CTGGCGTTCA ACGAATGGTA CCACAAATAC GCGCCGACCG AGATGAAGGA CACCAAGCTG
TGCTTCGCCT TCATCCATGA TCCGGGGGCG CTGCACGGCA AGAAGAAGGT GGTGGTGCCG
GCCGACATGA AGGGCCTCAA GGTGCGGCCG GCGCAGTCGA CCATCGGCGA GATGGTCAAG
CTGTTCGGCG GCACCAATGT GCAGGCTTCG GCGCCGGAAT CGCGCGACGC GCTGGAGCGC
GGCGTCGCCG ACGAAATCAC CTTCCCGTGG GGCTCGATCT TCCTGTTCGG CATCGACAAG
GTGGTCAAGT ATCACATGGA CGTGCCGCTG TATTCGACGG TGTTCACCTA CAACATCGGC
CTGAAGGCCT ACAACGCGCT GTCGGCCACC CAGAAGAAGG TGATCGACGA TCATTGCACG
CCGGAATGGG CCTCCAAGGT TACCGACCCG TGGGTCGATT TCGAGGCCAA CGGCCGCACC
AAGATGAAGG CGCTGGAAGG CCACGAGGTG TATCCGCTGA CGGCCGAACA ACTCGCCGAA
TGGAAGAAGG CGACCGAGCC CCTGCACACG AGCTGGGCCG AGGCGGTGAA GAAGGCGGGT
GGCGACGCCG CTGCCATCGA TGGCGAACTC AAGGCCGCGC TGAAGAAGTA CGACGCCGGG
CTGTAA
|
|---|
| Protein sequence | MRKTMLALLL AASMTPAVVS AASAQDKTVN WKVSLWVPPA HPLVPATKEW AADIEKASGG
TIKMAVFPSE QLGKAFDHYD MARDGIADVT YVNPGYQPGR FPIVSAGQLP FLFKDGKKGT
LAFNEWYHKY APTEMKDTKL CFAFIHDPGA LHGKKKVVVP ADMKGLKVRP AQSTIGEMVK
LFGGTNVQAS APESRDALER GVADEITFPW GSIFLFGIDK VVKYHMDVPL YSTVFTYNIG
LKAYNALSAT QKKVIDDHCT PEWASKVTDP WVDFEANGRT KMKALEGHEV YPLTAEQLAE
WKKATEPLHT SWAEAVKKAG GDAAAIDGEL KAALKKYDAG L
|
|---|
| |