| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3581 |
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| Symbol | |
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| ID | 3911383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4105610 |
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| End bp | 4106179 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637885483 |
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| Product | TRAP dicarboxylate family transporter DctQ subunit |
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| Protein accession | YP_487187 |
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| Protein GI | 86750691 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.120182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.15942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTCCG ATTTCGACAG ACTGACCAAT CGTCTGCCCG GCGCGCTGCC GACGCGGCGG
TTTCCGAAGA ACGGCATGGA TCGCTTCATC GACGTGATCG AATGGATCGC GGCGTTCTTC
GTCGGCGTCG TCGCCCTGAA CACCTTCCTC GCGGTGTTCA TGCGCAAATT CTTCTCGGTG
ACGATCCCCG ATTACTACAA TGTCGGCCAG TTCCTGCTCG GCATCCTGAT CTTCTGGGGG
ATCGCGGCGA CGTCCTATCG CGGCACCCAC ATCACCGTCG ATCTGCTGTG GGGCAATGTC
GGCCCCCGGG CGCAGCGCTG GATCGACGTG TTCGCGACGC TGGTGCTGCT GTTCGTCGTC
ACGGTGCAGA CCTACACGCT GTTCGACAAG GTGGTGACGA CCAGGGCCGA CCACATCGTC
ACCATGGACC TGCAAATGCC GATCTGGCCG TTCTTTCTCG TCGCCTGGCT CGGCGACGTC
GCGGCCGTCG TGCTGATCGC GATTCGAACC TGGCGGCTGA TCTTCCATCC GGACGAACTG
CACGACCCCA AATTCAAGCC GGTGGAATGA
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| Protein sequence | MTSDFDRLTN RLPGALPTRR FPKNGMDRFI DVIEWIAAFF VGVVALNTFL AVFMRKFFSV
TIPDYYNVGQ FLLGILIFWG IAATSYRGTH ITVDLLWGNV GPRAQRWIDV FATLVLLFVV
TVQTYTLFDK VVTTRADHIV TMDLQMPIWP FFLVAWLGDV AAVVLIAIRT WRLIFHPDEL
HDPKFKPVE
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