| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3575 |
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| Symbol | |
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| ID | 3911377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4099019 |
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| End bp | 4100176 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885477 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_487181 |
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| Protein GI | 86750685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.807298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.720427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGT TCAAACTATC TGCTGCTGCG TTCGCCGTGG CGATCGCGCT GCCGGCGATG
TCCGGCGCCG CGCTCGCCGA GACCAATGAA ATCACCGTGG GCATCACCGT CACCACGACG
GGCCCGGCCG CCGCGCTCGG CATTCCGGAG CGCAACGCGC TGGAATTCGT GGCCAAGGAA
ATCGGCGGTC ACCCGATCAA GATGATCGTG CTCGACGACG GCGGCGACCC GACCGCGGCG
ACCACCAACG CGCGGCGTTT CGTCACGGAG TCGAAGGCCG ACGTGATCAT GGGTTCGTCG
GTGACGCCGC CGACCGTGGC GGTCTCGAAC GTCGCCAACG AGGCGCAGGT GCCGCATATC
GCGCTGGCGC CGCTGCCGGT CACGCCGGAG CGGGCGAAGT GGTCCGTGGT GATGCCGCAG
CCGATCCCGA TCATGGGCAA GGTGCTCTAC GAGCACATGA AGAAGAACAA CATCAAGACC
GTCGGCTACA TCGGCTATTC CGACAGCTAC GGCGATCTGT GGTTCAACGA TCTCAAGAAG
CAGGGCGAGG CGATGGGCCT CAAGATCGTC GCCGAGGAAC GCTTCGCGCG CCCCGACACC
TCGGTCGCGG GTCAGGTGCT GAAGCTCGTT GCCGCCAATC CCGACGCCAT CCTGGTCGGG
GCGTCCGGCA CCGCCGCGGC GCTGCCGCAG ACCGCGCTGC GCGAGCGCGG CTACAACGGG
CTGATCTATC AGACCCACGG CGCCGCCTCG ATGGACTTCA TCCGCATCGC CGGCAAGTCC
GCCGAGGGCG TGCTGATGGC GTCCGGCCCG GTGATGGATC CGGAAGGCCA GAACGACAGC
GCGCTGACCA AGAAGCCCGG CCTCGAACTC AACACGGCCT ATGAAACCAA GTACGGCCCG
AACAGCCGCA GCCAGTTCGC CGGCCACTCC TTCGACGCCT TCAAGGTACT CGAGCGCGTG
ATTCCGGTGG CGCTGAAGAC CGCCAAGCCC GGCACGCAGG AATTCCGCGA AGCGATCCGT
AAGGCGCTGC TCACCGAAAA GGACATCGCG GCGAGCCAGG GCGTCTACAG CTTCACCGAG
ACGGATCGCT ATGGTCTCGA CGATCGTTCG CGCATCCTGC TGACGGTGAA GAACGGCAAA
TACGTCATCG TCAAGTAA
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| Protein sequence | MNGFKLSAAA FAVAIALPAM SGAALAETNE ITVGITVTTT GPAAALGIPE RNALEFVAKE
IGGHPIKMIV LDDGGDPTAA TTNARRFVTE SKADVIMGSS VTPPTVAVSN VANEAQVPHI
ALAPLPVTPE RAKWSVVMPQ PIPIMGKVLY EHMKKNNIKT VGYIGYSDSY GDLWFNDLKK
QGEAMGLKIV AEERFARPDT SVAGQVLKLV AANPDAILVG ASGTAAALPQ TALRERGYNG
LIYQTHGAAS MDFIRIAGKS AEGVLMASGP VMDPEGQNDS ALTKKPGLEL NTAYETKYGP
NSRSQFAGHS FDAFKVLERV IPVALKTAKP GTQEFREAIR KALLTEKDIA ASQGVYSFTE
TDRYGLDDRS RILLTVKNGK YVIVK
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