| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3572 |
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| Symbol | |
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| ID | 3911374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4095246 |
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| End bp | 4097015 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885474 |
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| Product | branched-chain amino acid transport system ATP-binding protein |
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| Protein accession | YP_487178 |
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| Protein GI | 86750682 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.317873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTT GGCTTCCCAT TCTGCTGTTC GCCGCCGTGA TGACGGCGCT GCCGCTGATC
CCTGGCATGC CGCCGTTCTG GATCGTGCTC TTGGACAATA TCGGCCTCGC CGCTCTGGTG
GCGATGGGCC TGGTGCTGCT GACCGGCGTC GGCGGCCTCA CCTCGTTCGG CCAGGCGGCG
TTCTGCGGCT TCGGCGCCTA CACCACCGCC TATCTGGCCA CGGTCTACGG CGTCTCGCCG
TGGCTGACGC TGCCGCTCTC GCTGTTGGTC GCCGGCACGG CCGCGGTGCT GCTCGGGCTG
ATGACGGTGC GGCTCAGCGG CCATTATCTG CCGCTCGGCA CCATCGCCTG GGGCATCTCG
CTGTACTACC TGTTCAGCAA GCTGGATTTT CTCGGCCGCA ATGACGGCAT CTCGCAAGTG
CCGCCGCTGT CGATCGGATC GCTGCAAATG TTCGATCCCG AGACGATCTA TTTCGTGATC
TGGGGCATGG TACTGATCAG CGCGGTGCTG ACCATGAACC TGCTCGACAG CCGCACCGGC
CGCGCCATCC GCGCGCTGCG CCGCGGGCAC ATTGCGGCGG AAGCCTTCGG CGTGCAGACC
GCGCGGGCGA AGCTGCTGGT GTTCATCTAT GCGGCGGTGC TGGCCGGCCT GTCCGGCTGG
CTCTACGCGC ACTTCCAGCG CAACGTGAAC CCGACCCCGT TCGGCCCGCA GGCCGGCATC
GAGTATCTGT TCATCGCCGT GGTCGGCGGC GCCGGCTATG TCTGGGGCGG CGTGCTCGGC
GCTGCGATCG TGATCATCCT GAAAGAAGTT CTGCAGGGCT ATCTGCCGAT GCTGTTCGGC
GGCCAGGGTC AGCTCGAGAT CATCGTGTTC GGCATCCTGC TGGTGTTGCT GCTGCAGCTC
GCGCCCGGTG GCGTCTGGCC GTGGCTGAGC AGTCTGATCC CGATCAAGAT CCGACGCTCC
CGGGTGGACG CCAGCGCCGC GCTCACGCCC CGCGAACGCA CGCCGGGCGC GACCGGCCCG
CTGCTCAAAG TCGAACGCGC GCGAAAGCAG TTCGGCGGCG TGGTCGCGGT CAACGACGTC
TCGTTCGAGG TCGATGCGCG CGAGATCGTC GCGCTGATCG GACCGAACGG CGCCGGCAAG
TCGACCACCT TCAACCTGAT CACCGGCATT CTCACCACCA CCGGCGGCAG GATCGAGCTG
CACGGCAAGC CGATCGACAA CGCGCCGCCG CAGGACGTGG TGCAGCTCGG CATCGCCCGC
ACCTTCCAGC ACGTCAAGCT GGTGCCGGAC ATGACCGTAC TGGAGAACGT CGCGATCGGC
GCGCATCTGC GCGGCAATGC CGGCGCGCTG ACCAGCATGC TGCGGCTCGA CCGCGCCGAC
GAGGCCAAGC TGCTCGCCGA AGCCACCCGG CAGATCGAGC GCGTCGGGCT CGGCGGCGAG
ATCGATCAGC TCGCAGGCAG TCTGTCGCTC GGTCAGCAGC GCATCGTCGA GATCGCGCGC
GCGCTGTGCG CCGATCCGAT GCTGCTGCTA CTCGACGAAC CCGCCGCGGG CCTGCGCCAC
ATGGAGAAAC AGCGCCTCGC CGCATTGCTG CGCCAGTTGC GCGACGGCGG CATGTCGGTG
CTGCTGGTCG AACACGACAT GGGCTTCGTG ATGGATCTCG CCGACCGCAT CGTCGTGCTG
GACTTCGGCA CGCGGATCGC CGAGGGCACG CCCGACGCGA TCAAGACCAA TCCCGAAGTC
ATCAAGGCCT ATCTCGGAGC CCTGGCATGA
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| Protein sequence | MPRWLPILLF AAVMTALPLI PGMPPFWIVL LDNIGLAALV AMGLVLLTGV GGLTSFGQAA
FCGFGAYTTA YLATVYGVSP WLTLPLSLLV AGTAAVLLGL MTVRLSGHYL PLGTIAWGIS
LYYLFSKLDF LGRNDGISQV PPLSIGSLQM FDPETIYFVI WGMVLISAVL TMNLLDSRTG
RAIRALRRGH IAAEAFGVQT ARAKLLVFIY AAVLAGLSGW LYAHFQRNVN PTPFGPQAGI
EYLFIAVVGG AGYVWGGVLG AAIVIILKEV LQGYLPMLFG GQGQLEIIVF GILLVLLLQL
APGGVWPWLS SLIPIKIRRS RVDASAALTP RERTPGATGP LLKVERARKQ FGGVVAVNDV
SFEVDAREIV ALIGPNGAGK STTFNLITGI LTTTGGRIEL HGKPIDNAPP QDVVQLGIAR
TFQHVKLVPD MTVLENVAIG AHLRGNAGAL TSMLRLDRAD EAKLLAEATR QIERVGLGGE
IDQLAGSLSL GQQRIVEIAR ALCADPMLLL LDEPAAGLRH MEKQRLAALL RQLRDGGMSV
LLVEHDMGFV MDLADRIVVL DFGTRIAEGT PDAIKTNPEV IKAYLGALA
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