Gene RPB_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3571 
Symbol 
ID3911373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4094200 
End bp4095240 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID637885473 
Productinner-membrane translocator 
Protein accessionYP_487177 
Protein GI86750681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.16314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACACGA CAATACTGCT GTTCCTGCTG CAGGACGGCA TCACCAACGG TGCGATCTAC 
GCGTTGCTCG GGCTGGCGCT GGTGCTGGTG TTCGCGGTGA CGCGGGTGAT CCTGATCCCG
CAGGGCGAAT TCATCACCTT CGGCGCATTG ACTTACGCGA CGCTGTCGGC GGGCGGCGTA
CCGGGCACCG CCGGGCTCGC GATGGTGATG GGCATCGTCG CCTTCGGCTT CGAATTGTTC
AGCACGCGCA GATCATTACG CGCCGCCAGG GTGTTTCGCG CCGCGCTGAT CTATCTGGTG
TTTCCCGCGG TCGTGCTCGC GCTGGCGACG CTGCTGCCGG CCACCCGTCC CGGCGTCGCG
GTCAACATCG CGCTGTCGCT GCTGATCGTC GCGGCGATCG GGCTGTTTCT GTACCGCATC
GCGTTCCAGC CGCTGGCGCA CACCTCGGTG CTGGTGCTGC TGATCGCCTC GGTCGGCGTC
CACCTCGCCT TGCAGGGCTT CGGCCTGGTG TTCTTCGGCG CCGAGGGCTT GCGCGGCCCG
CCTTTGTCCG ATGCCGCGGT CACGATCGGG CCGTTGCGCT TCACCGGCCA GAGCATCGCG
GTCTACGCCA TCACCATCGC GCTGATGGCG GCGCTGTGGC TGTTCTTCGG CTACACTCGC
TACGGCAAGG CGCTGCGCGC CACCGCGGTG AACCGGCTCG GCGCCCGCCT GGTCGGCATC
CGCACCTCAT TGAGCGGCCA GCTCGCCTTC CTGCTCGCCT CGGTGATCGG CGCGATCTCC
GGCATCCTGA TCGTCCCGAT CACCACGCTC TATTACGACA CCGGCTTCCT GATCGGCCTC
AAGGGCTTCG TCGCTGCGAT CATCGGCGGC CTGATCAGCT ATCCGCTCAC CGCCTTCGCG
GCGATCGTGG TCGGCGTGGT CGAGGCTTTC TCCTCGTTCT ACGCCTCGAA CTACAAGGAG
GTCATCGTCT TCACGCTGAT CCTGCCGGTG CTGGTGCTGC GGTCGCTCGC CGCCCCCGCG
GTCGACGAAG AAAAGGATTG A
 
Protein sequence
MNTTILLFLL QDGITNGAIY ALLGLALVLV FAVTRVILIP QGEFITFGAL TYATLSAGGV 
PGTAGLAMVM GIVAFGFELF STRRSLRAAR VFRAALIYLV FPAVVLALAT LLPATRPGVA
VNIALSLLIV AAIGLFLYRI AFQPLAHTSV LVLLIASVGV HLALQGFGLV FFGAEGLRGP
PLSDAAVTIG PLRFTGQSIA VYAITIALMA ALWLFFGYTR YGKALRATAV NRLGARLVGI
RTSLSGQLAF LLASVIGAIS GILIVPITTL YYDTGFLIGL KGFVAAIIGG LISYPLTAFA
AIVVGVVEAF SSFYASNYKE VIVFTLILPV LVLRSLAAPA VDEEKD