Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3571 |
Symbol | |
ID | 3911373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4094200 |
End bp | 4095240 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637885473 |
Product | inner-membrane translocator |
Protein accession | YP_487177 |
Protein GI | 86750681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.16314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACACGA CAATACTGCT GTTCCTGCTG CAGGACGGCA TCACCAACGG TGCGATCTAC GCGTTGCTCG GGCTGGCGCT GGTGCTGGTG TTCGCGGTGA CGCGGGTGAT CCTGATCCCG CAGGGCGAAT TCATCACCTT CGGCGCATTG ACTTACGCGA CGCTGTCGGC GGGCGGCGTA CCGGGCACCG CCGGGCTCGC GATGGTGATG GGCATCGTCG CCTTCGGCTT CGAATTGTTC AGCACGCGCA GATCATTACG CGCCGCCAGG GTGTTTCGCG CCGCGCTGAT CTATCTGGTG TTTCCCGCGG TCGTGCTCGC GCTGGCGACG CTGCTGCCGG CCACCCGTCC CGGCGTCGCG GTCAACATCG CGCTGTCGCT GCTGATCGTC GCGGCGATCG GGCTGTTTCT GTACCGCATC GCGTTCCAGC CGCTGGCGCA CACCTCGGTG CTGGTGCTGC TGATCGCCTC GGTCGGCGTC CACCTCGCCT TGCAGGGCTT CGGCCTGGTG TTCTTCGGCG CCGAGGGCTT GCGCGGCCCG CCTTTGTCCG ATGCCGCGGT CACGATCGGG CCGTTGCGCT TCACCGGCCA GAGCATCGCG GTCTACGCCA TCACCATCGC GCTGATGGCG GCGCTGTGGC TGTTCTTCGG CTACACTCGC TACGGCAAGG CGCTGCGCGC CACCGCGGTG AACCGGCTCG GCGCCCGCCT GGTCGGCATC CGCACCTCAT TGAGCGGCCA GCTCGCCTTC CTGCTCGCCT CGGTGATCGG CGCGATCTCC GGCATCCTGA TCGTCCCGAT CACCACGCTC TATTACGACA CCGGCTTCCT GATCGGCCTC AAGGGCTTCG TCGCTGCGAT CATCGGCGGC CTGATCAGCT ATCCGCTCAC CGCCTTCGCG GCGATCGTGG TCGGCGTGGT CGAGGCTTTC TCCTCGTTCT ACGCCTCGAA CTACAAGGAG GTCATCGTCT TCACGCTGAT CCTGCCGGTG CTGGTGCTGC GGTCGCTCGC CGCCCCCGCG GTCGACGAAG AAAAGGATTG A
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Protein sequence | MNTTILLFLL QDGITNGAIY ALLGLALVLV FAVTRVILIP QGEFITFGAL TYATLSAGGV PGTAGLAMVM GIVAFGFELF STRRSLRAAR VFRAALIYLV FPAVVLALAT LLPATRPGVA VNIALSLLIV AAIGLFLYRI AFQPLAHTSV LVLLIASVGV HLALQGFGLV FFGAEGLRGP PLSDAAVTIG PLRFTGQSIA VYAITIALMA ALWLFFGYTR YGKALRATAV NRLGARLVGI RTSLSGQLAF LLASVIGAIS GILIVPITTL YYDTGFLIGL KGFVAAIIGG LISYPLTAFA AIVVGVVEAF SSFYASNYKE VIVFTLILPV LVLRSLAAPA VDEEKD
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