| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3570 |
|---|
| Symbol | |
|---|
| ID | 3911372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4093520 |
|---|
| End bp | 4094035 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637885472 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_487176 |
|---|
| Protein GI | 86750680 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.247728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC CGAAATCCGC CGTCGCCAAG CCGCCCCGCG CCGCGCGCAA GGAGGCGCCC
GCCGCGGCGG CTGCCGATCC CGGCGAACTG GCGATGGGCG AACTGTCGGA GCTGCTCGGC
TACGCGCTGA AGCGGGCCCA GCTCCGGGTG TTCGAGGACT TCCTGCAATG CGTCGCGCCG
GTGCAGCTCA CCCCGGCGCA GTTCTCGGTG CTGCTGCTGC TCGACAACAA TCCCGGCCGC
AACCAGACCG AGATCGCCAA TACGCTCGGC ATCCTCCGGC CGAATTTCGT GGCGATGCTC
GACGCGCTGG AAAGCCGCGG GCTGTGCCAG CGCACGCGAT CGCCGAACGA CCGCCGCTCG
CACATCCTGA TTCTGACCGA CAAGGGCCGC GCCACGCTGG CGCGCGCCAA GAAACTGGTG
GCGACCCGGC ACGAGGAACG GCTCAGCGAA CTTCTCGGCG ACGACAATCG CGCCGCGTTG
CTGGCGATGC TCGGCAAGAT CGCGCGGGAA TTCTGA
|
|---|
| Protein sequence | MTAPKSAVAK PPRAARKEAP AAAAADPGEL AMGELSELLG YALKRAQLRV FEDFLQCVAP
VQLTPAQFSV LLLLDNNPGR NQTEIANTLG ILRPNFVAML DALESRGLCQ RTRSPNDRRS
HILILTDKGR ATLARAKKLV ATRHEERLSE LLGDDNRAAL LAMLGKIARE F
|
|---|
| |