| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3563 |
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| Symbol | dnaE2 |
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| ID | 3911365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4080171 |
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| End bp | 4083668 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885465 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_487169 |
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| Protein GI | 86750673 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.863163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.552046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CGCGCTACGC CGAGATCGGC GTCACCACCA ATTTCTCGTT CCTCGAAGGC
GGCTCGCACC CGCAGGACTA CGTGCATCAG GCGAGTCGTC TCGGCCTCGA TGCGATCGGC
ATCGCCGACC GCAACACGCT GGCCGGCGTG GTTCGCGCCT ACAGCGAGCT CGACAACGAG
GAGCTCGCTT ACAAACCAAA GCTGCTGATC GGTGCAAGGC TGTGTTTTGT CGACGGCACG
CCCGACGTGC TGGCCTATCC GACCGACCGC GCCGCCTACG GCCGGCTGTG CCGGCTGCTC
AGCGCCGGCA AGCTGCGCGC CGGGAAGGGC GAGTGCCATC TGACGTTTGC GGATCTGGAG
GCATTTGTGT CGAGCAATGC TGCTCGACCC TTTCCTTCGT CATGGCCGGG CTTGACCCGG
CCATCCACGT CTTTGCAGCC GCGCGTCTTG CAAGACGTGG ATGCGCGGGA CAAGCCCGGG
CATGACGGGG GAAAACGCGA AATCGGCCGC TCGCAGATCC TGTTCGTCCT GATGCCGCCC
TATCGCTTTC AGGCGAAGGC GATTACAGCC GCGTTGGAGC GGCTGACGGC GCTGAACAGC
GGCAATGTCT GGCTCGCCCT GGCGCCGTAT TATCGCGGCG ACGACAAGCG CCGGCTGGCG
CGGTTGCGGC GGATCGCGGC GGCGGCGGAC GTGCCCGGCA TCGCCACCAA CGACGTGCTG
TATCACCACC CGTCGCGGCG CGCGCTGCAG GACGTGCTGA CCTGCGTGCG CGACAAGACC
ACCATCGACA AGGCGGGGCG ACGCCTGGAA GGCAACGCCG AGCGGCATCT CAAGCCCGCC
GCCGAGATGG CGCGGCTGTT CCGCGCCGAC CTCGACGCGG TCGCCGAGAC GCTGCGCTTT
GCGGATCGCA TCTCGTTCAC GCTGGACGAA TTGAAATATC ACTACCCCGA CGAGCCGGTG
CCGCCCGGCA AGACCGCGCA GCAGCATCTC GAAGATCTCA CCCGAGAGGG CATCGCAACC
TATTTCCCGA ACGGCATCAG CGACAGATTG CGCGCCACCA TCGCCAAGGA ATTGACCCTC
ATCGCCAAGC GCGACTACGC GCATTACTTC CTCACCGTGC ACGACATCGT CCGCTATGCG
CGGTCGCAGA ACATCCTGTG CCAGGGGCGC GGCTCGGCGG CGAATTCGGC CGTCTGCTAC
GTGCTCGGCA TCACCTGCGT CGATCCGACC GAGATCGACC TGTTGTTCGA GCGCTTCGTC
TCGGAGGAAC GCGACGAGCC GCCGGACATC GACGTCGATT TCGAACATTC GCGCCGCGAA
GAGGTGATGC AGTACATCTA TCGCCGCTAC GGCCGGCATC GCGCCGCGAT CGTCTCCACC
GTGATTCACT ATCGGCCGCG CTCGGCGATC CGCGACGTCG GCAAGGCGCT GGGGCTCTCC
GAAGACGTCA CCGCGGCGCT CGCCGACACG GTGTGGGGAA GCTGGGGCAA GGGCCTGAGC
GAGATGCAGG TGCGGCAGGC CGGGCTCGAT CCGACCAATC CGATGATCGG GCGCGCGGTC
GAGCTCGCCA CCGAGCTGAT CGGCTTTCCG CGGCATCTGT CGCAGCATGT CGGCGGCTAC
GTGCTGACGC AGGACCGGCT CGACAGCTAC GTGCCGATCG GCAACGCCGC GATGGCGGAC
CGCACCTTCA TCGAATGGGA CAAGGACGAC ATCGACGCGG TGAAGATGAT GAAGGTCGAC
GTGCTGGCGC TCGGGATGCT GACCTGCATC CGCAAGGGTT TCGACCTGAT CGCGCAGCAC
AAGGGCGTGC GCTTCCAGCT CTCCGACATC AAGTCGGAGG ACGACAACAA CGTCTACCAG
ATGCTCCAGC GCGGCGAGTC GATCGGGGTG TTCCAGGTCG AGAGCCGGGC GCAGATGAAC
ATGCTGCCGC GGCTGAAGCC GCGCTGCTTC TACGATCTCG TCATCGAGGT CGCGATCGTG
CGGCCGGGGC CGATCCAGGG CGACATGGTG CATCCTTATT TGAGACGGCG GAACGGCCAG
GAGCCGGTGG TGTATCCGTC GCCGTCCGGC GAGGCCGGCG ACAAGAACGA ACTGCAGCAG
ATCCTCGGCA AGACGCTCGG CGTGCCGCTG TTCCAGGAGC AGGCGATGCG CATCGCCATC
GAGGCGGCGC ATTTCACGCC GGACGAGGCC AATCAGCTCC GCCGCGCGAT GGCGACGTTC
CGCAATGTCG GCACCATCGG CAAGTTCGAG AGCAAGATGA TCGGCAATCT GATGGCGCGC
GGCTACGACG CCACCTTCGC CAAGAACTGC TTCGAACAGA TCAAGGGCTT CGGCTCCTAC
GGCTTTCCCG AAAGCCATGC CGCCAGCTTC GCCAAGCTGG TCTATGTCTC GGCGTGGATG
AAATGCGAGC ACCCCGACGC GTTCTGCTGC GCGCTGCTCA ACTCACAGCC GATGGGTTTC
TACGCGCCGG CGCAGATCGT CGGCGATGCA CGGGCCAACA AGGTCGAGGT GCGGCCGGTC
GACGTGTCGT TCAGCGACGG GCAATGCACG CTGGAGGAGC GCTGCGGCGC GTATCACGCG
GTGCGGCTCG GCTTCCGCCA GATCGACGGC TTCCGCTGGG CCGATCCGGA CGAAGAGCGC
GTGCGGCTGG AAGCCGGCCT GCCGCCGAGC GACGACTGGG CGGCCCGCAT CGTCGCGGCG
CGGGCGAGGG GGCCGTTCGG CTCGCTCGAA CAGTTCGCGC GGATCACGGC GCTGCCGAAG
CGCGCGCTGA TCCTGCTGGC GGACGCCGAT GCCTTCCGCT CGCTCGGGCT CGATCGCCGC
GCCGCGCTGT GGGCGGTGCG GCGGCTGCCC GACGACGTGC CGCTGCCGTT GTTCGAAGCC
GCGAGCGCGC GCGAACAGCA GGACGAACAG GCCGCGCCGC TGCCGCAGAT GCCGATGGCC
GAGCATGTCG TCGCGGATTA TCAGACGGTG CGGCTGTCGC TGAAGGGCCA TCCGTTGGAA
TTCCTGCGGG CGGTGTTCGC GACGGAGCGG GTGGTGACGT GTCGCGAGGT CTCGGAGACG
CGGCGCAATG GCCGGCGCGT GCGCTGCGCC GGCGTGGTGC TGGTGCGGCA GCGGCCGGGT
TCGGCCAGCG GCGTGATCTT CATGACCATC GAGGACGAGA CCGGCATCGC CAACATCGTG
GTGTGGCCAT CGGTGATGGA GAAATTTCGC AAGGAAGTGA TGGGCGCCCG GCTGATCCTG
GTCGAAGGCA AGATCCAGGC GAGCCCGGAA GGTGTAGTGC ATCTGGTGGC GGAGCGGTTG
GTCGATCGCT CGTCCGAGAT GGGCCGCCTG TCCGAGGGCC TCGCTCGTCC GCCGCTGCCG
ACCGGGGCCG ACCTGTATGA ACCGCTGACG TATGAACCGC TCAACGGCGA CCGCCGCGAC
AATCCCGACG CGCCCGCCCA GCGCCTGCGC CACCCCCGCG ACGTCCGCAT CCTGCCGCCG
TCGCGGGATT TTCATTGA
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| Protein sequence | MNAPRYAEIG VTTNFSFLEG GSHPQDYVHQ ASRLGLDAIG IADRNTLAGV VRAYSELDNE
ELAYKPKLLI GARLCFVDGT PDVLAYPTDR AAYGRLCRLL SAGKLRAGKG ECHLTFADLE
AFVSSNAARP FPSSWPGLTR PSTSLQPRVL QDVDARDKPG HDGGKREIGR SQILFVLMPP
YRFQAKAITA ALERLTALNS GNVWLALAPY YRGDDKRRLA RLRRIAAAAD VPGIATNDVL
YHHPSRRALQ DVLTCVRDKT TIDKAGRRLE GNAERHLKPA AEMARLFRAD LDAVAETLRF
ADRISFTLDE LKYHYPDEPV PPGKTAQQHL EDLTREGIAT YFPNGISDRL RATIAKELTL
IAKRDYAHYF LTVHDIVRYA RSQNILCQGR GSAANSAVCY VLGITCVDPT EIDLLFERFV
SEERDEPPDI DVDFEHSRRE EVMQYIYRRY GRHRAAIVST VIHYRPRSAI RDVGKALGLS
EDVTAALADT VWGSWGKGLS EMQVRQAGLD PTNPMIGRAV ELATELIGFP RHLSQHVGGY
VLTQDRLDSY VPIGNAAMAD RTFIEWDKDD IDAVKMMKVD VLALGMLTCI RKGFDLIAQH
KGVRFQLSDI KSEDDNNVYQ MLQRGESIGV FQVESRAQMN MLPRLKPRCF YDLVIEVAIV
RPGPIQGDMV HPYLRRRNGQ EPVVYPSPSG EAGDKNELQQ ILGKTLGVPL FQEQAMRIAI
EAAHFTPDEA NQLRRAMATF RNVGTIGKFE SKMIGNLMAR GYDATFAKNC FEQIKGFGSY
GFPESHAASF AKLVYVSAWM KCEHPDAFCC ALLNSQPMGF YAPAQIVGDA RANKVEVRPV
DVSFSDGQCT LEERCGAYHA VRLGFRQIDG FRWADPDEER VRLEAGLPPS DDWAARIVAA
RARGPFGSLE QFARITALPK RALILLADAD AFRSLGLDRR AALWAVRRLP DDVPLPLFEA
ASAREQQDEQ AAPLPQMPMA EHVVADYQTV RLSLKGHPLE FLRAVFATER VVTCREVSET
RRNGRRVRCA GVVLVRQRPG SASGVIFMTI EDETGIANIV VWPSVMEKFR KEVMGARLIL
VEGKIQASPE GVVHLVAERL VDRSSEMGRL SEGLARPPLP TGADLYEPLT YEPLNGDRRD
NPDAPAQRLR HPRDVRILPP SRDFH
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