| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3557 |
|---|
| Symbol | |
|---|
| ID | 3911359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4070564 |
|---|
| End bp | 4071343 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637885459 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_487163 |
|---|
| Protein GI | 86750667 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.203643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.505075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTT TTGAATTCAT CATCGTCGAA CGCCAGAACG CCGTCGGCAT CATCAAGCTC
AACCGTCCGA AGCTGTTGAA CGCGCTGTCG TTCGGTGTGT TCGGCGAGAT CGGCGCGGCG
GTCGATGATC TCGAAGCCGA CGACGCGATC GGATGCATCC TGATCACCGG CAGTGACAAG
GCGTTCGCCG CCGGCGCCGA TATCAAGGAG ATGCAGCCGA AGGGCTTCAT CGACATGTTC
AACGAGGACT TCACCTCGAT CGGCGGCGAC CGTCTGGCGC GCTGCCGCAA GCCGACCATC
GCCGCGGTCG CCGGCTACGC GCTCGGCGGC GGCTGCGAAT TGGCGATGAT GTGCGACATC
ATCATCGCGG CCGACACTGC GAAGTTCGGC CAGCCGGAAA TCACCCTCGG AACAATCCCG
GGCATTGGCG GGACGCAGCG CCTGACGCGC GCCATCGGCA AGTCGAAGGC GATGGATCTG
TGCCTCACCG GACGGATGAT GGATGCGCAG GAAGCCGAAC GCGCCGGCCT GGTCAGCAGG
ATCGTGCCCG CCGACAAGCT GATGGAAGAG GCGCTCGCCG CCGCCGAGAA GATCGCGTCG
ATGTCGTATC CTGCGGCCGC GATGGCGAAA AGCGCGGTGA ACCGTGCGCT GGAAACCACA
CTGGCCGAAG GTCTCGCGGT CGAGCGCGAT TTGTTCCGCT CCAGCTTCGC ACTCGAAGAT
CGCTCCGAGG GCATGGCGGC CTTCATCGAA AAGCGCAAAC CGAACAACAA GAACCGCTGA
|
|---|
| Protein sequence | MSTFEFIIVE RQNAVGIIKL NRPKLLNALS FGVFGEIGAA VDDLEADDAI GCILITGSDK
AFAAGADIKE MQPKGFIDMF NEDFTSIGGD RLARCRKPTI AAVAGYALGG GCELAMMCDI
IIAADTAKFG QPEITLGTIP GIGGTQRLTR AIGKSKAMDL CLTGRMMDAQ EAERAGLVSR
IVPADKLMEE ALAAAEKIAS MSYPAAAMAK SAVNRALETT LAEGLAVERD LFRSSFALED
RSEGMAAFIE KRKPNNKNR
|
|---|
| |