| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3550 |
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| Symbol | |
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| ID | 3911352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4063224 |
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| End bp | 4064369 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885452 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_487156 |
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| Protein GI | 86750660 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCAG CTGCCGTCAT TTCGGGCATG CCAGCGGGCA CGGTGGACGG GGCCACACGG
GCTCGGACGC TTGCTGTCCG TGCGCGGAGA ATGAAGCAAC GCCGGCAGAT GTTCGATCTG
GTCGCAGCGA GCTATCTGAC CGACGCCCTG CTCCTGCTGA TCTACAGCTT CACCGGCACG
ATCCCCGAGA TCGTCGTTCC GACCTACATC GCCTGCGGCT TCGGCATCAT CGTCGGAAGC
ATTGCGCTGT CGGAATCGGG TTTTTACGAT CGTTTCAAGG ACCACTATCT GGTTCTGCCG
ACCGTCGCGC TCAATGTCGC GCTGGTGATG GGATTTTGCA TCTGGGTGCC GCAGATCGCA
TTCCTGTTCC TGTGCTCGCT GTTCATCATC TTCAATTTCG CGTCGCTGCG CGCCAGCACA
AGTCAGAGCT TGATCTGCTG GGCGACGATG GCTGCCGCGT TGGTGGTGCT GTTGGTCTTC
ACGGACACGC CGATCGCGAT TCCGCACGAC ACTCTGCTCG AGCGCACCGT GACGATGCTG
GCGCTGGTGC TGACCCTCGG CCGCTGCATG TTCATCGGGA TGTATTCCAG CGCGATGCGG
GTGTCGCTCT ACAAACGCGG TCTCCAGTTG CGCGAGGCCT ACCGGCGGAT CGAGGAGCTC
GCGGAGCTCG ACGAACTCAC CGGCGCGTTC AATCGCCGCT GTATCATGCG GATGCTCGAC
GACGAGATCG CCCGGGCCGA ACGCAGCGCG ACGCCGCTGT CGCTCGCCTT GATCGACCTC
GACTGGTTCA AGCGGATCAA CGACAGCTTC GGCCACCCCA CCGGCGACGA GGTCCTGCGC
ACCTTCGCGA TCACCATCTT CGCCAACATC CGCAGCTTCG ACCGGTTCGG CCGCTACGGC
GGCGAGGAAT TCCTGCTGCT GCTGCCGAAC ACGTCGCGCG AAGACGCCCA CGCCCTGCTG
GACCGGCTGC GGGAAATCGT CGGGGAGCTG GACTGGACGG CGTTCTCGCC CGGGATGCGG
GTGACGCTCT CCGCCGGTGT CACGACGATG TCTCCGGACG AGACTGCCGA ATCCGTGCTG
GCCCGCGCCG ACAGTGCGCT CTATGCGGCC AAGGAAAAGG GACGCAACAG AATCGCCACG
ACCTGA
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| Protein sequence | MGSAAVISGM PAGTVDGATR ARTLAVRARR MKQRRQMFDL VAASYLTDAL LLLIYSFTGT
IPEIVVPTYI ACGFGIIVGS IALSESGFYD RFKDHYLVLP TVALNVALVM GFCIWVPQIA
FLFLCSLFII FNFASLRAST SQSLICWATM AAALVVLLVF TDTPIAIPHD TLLERTVTML
ALVLTLGRCM FIGMYSSAMR VSLYKRGLQL REAYRRIEEL AELDELTGAF NRRCIMRMLD
DEIARAERSA TPLSLALIDL DWFKRINDSF GHPTGDEVLR TFAITIFANI RSFDRFGRYG
GEEFLLLLPN TSREDAHALL DRLREIVGEL DWTAFSPGMR VTLSAGVTTM SPDETAESVL
ARADSALYAA KEKGRNRIAT T
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