| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3549 |
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| Symbol | |
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| ID | 3911351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4062263 |
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| End bp | 4062832 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637885451 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_487155 |
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| Protein GI | 162138520 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAACA AGCAGGCGAC TGCGGACGAG GTGTTGATCG CCCGGATTGC TCAAGGCGAC
CGTTCTGCGA TGCAGGTCCT CTATGGCAGG CATCAGGTGC GGGTGTTTCG CTTCGGGCTG
AGGCTGGTGC GGAACGAACA GATCGCGGAG GACCTTATCA GTGAGGTCTT TCTTGATGTC
TGGCGCCAGG CGGGGAAGTT CGAGGGGCGA TCATCCGTTT CCACCTGGCT GTTGGCGATC
ACGCGGTTCA AGGCGCTCTC CGCGCTGCGA CGCCGCAAGG ATGCCGAACT GGACGACGAG
GCTGCCGCCG CGATCGAGGA TCCATCGGAC GATCCGGAAG TGGCGGTCCA GAAAAAGGAC
ACCAGCGATG TGTTGCGAAA GTGCCTCGAG GGGCTTTCGT CGGACCATCG GGAGATCGTC
GATCTCGTCT ACTACCATGA GAAATCGGTG GAAGAGGTCG CTCATATTGT GGGAATTCCG
GAGAACACCG TGAAGACCCG ACTGTTTTAT GCGCGCAAGA AACTGGCCGA TCTGCTGCAG
GCAGCCGGCG TGCAGCGAGG CTGGCCATGA
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| Protein sequence | MSNKQATADE VLIARIAQGD RSAMQVLYGR HQVRVFRFGL RLVRNEQIAE DLISEVFLDV
WRQAGKFEGR SSVSTWLLAI TRFKALSALR RRKDAELDDE AAAAIEDPSD DPEVAVQKKD
TSDVLRKCLE GLSSDHREIV DLVYYHEKSV EEVAHIVGIP ENTVKTRLFY ARKKLADLLQ
AAGVQRGWP
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