Gene RPB_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3542 
Symbol 
ID3911344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4052935 
End bp4053927 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content69% 
IMG OID637885444 
Productarginine/ornithine transport system ATPase 
Protein accessionYP_487148 
Protein GI86750652 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family 
TIGRFAM ID[TIGR00750] LAO/AO transport system ATPase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.749977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CAAGTAAGAA GCCGCTCGAT CTGCCGTCGC TGGCGGGCGA GGTCCGCGCC 
GGCAATCGCG CAGCGCTGGC GCGCGCGATC ACGCTGATCG AGAGCCGCCG CGCCGATCAT
CAGGCGTCCG CGCGCGCGCT GGTGCAGGAG CTGCTGCCGC AGACCGGCCG CGCGATCCGT
GTCGGCATCA CCGGCTCGCC CGGCGTCGGC AAATCGACGA CGATCGACGA ACTCGGGATG
TATCTGATCG CGCAGGGCAA CAAGGTCGCG GTGCTGGCGG TCGATCCATC TTCCGCGCGC
ACCGGCGGCT CGATCCTCGG CGACAAGACG CGGATGGCGC GGCTCTCCGC CGAACCCGAC
GCCTTCATCC GTCCCTCGCC GTCGTCGGGC ACGCTCGGCG GCGTCGCGGC GAAGACGCGC
GAGGCAATGC TGCTGTGCGA GGCCGCCGGC TTCGACGTGG TGCTGGTCGA GACCGTCGGC
ATCGGCCAGT CCGAGACCGC TGTCTGCGAC ATGACCGATT TCTTCCTCGC GCTGATGCTG
CCGGGTGCCG GCGACGAGTT GCAGGGCATC AAGAAGGGTC TGGTCGAACT CGCCGACATG
ATCGCGATCA ACAAGGCCGA CGGCGACAAT ATCGCCCGCG CCAATCTCGC CGCCGGCGAA
TATCGCGCCG CGCTGCATAT CCTCACCCCG CGCTCGCCGC ATTGGCAGCC GCCGGTGGTG
ACCTATTCGG CGATCACCGG GACAGGCATC GCCGAACTGT GGCAGAGCGT CCTCGATCAT
CGCACGGCCA CGACCGCACC CGGCGAATTC GACGCGCGAC GGCGCGAGCA GCAGGTGAAG
TGGATGTGGA CGATGCTCGA GGATCGCTGG AAGGCACGGC TGAAGAGCGA CCCCGCGATC
CGCGCCAAGG TGAAGTCCAC AGAAGCCGCC GTCGCCGAAG GCCGCGTCAC GCCGGCGATC
GGCGCCGACC AGATCGCGGA GCTCCTGGCA TGA
 
Protein sequence
MNAPSKKPLD LPSLAGEVRA GNRAALARAI TLIESRRADH QASARALVQE LLPQTGRAIR 
VGITGSPGVG KSTTIDELGM YLIAQGNKVA VLAVDPSSAR TGGSILGDKT RMARLSAEPD
AFIRPSPSSG TLGGVAAKTR EAMLLCEAAG FDVVLVETVG IGQSETAVCD MTDFFLALML
PGAGDELQGI KKGLVELADM IAINKADGDN IARANLAAGE YRAALHILTP RSPHWQPPVV
TYSAITGTGI AELWQSVLDH RTATTAPGEF DARRREQQVK WMWTMLEDRW KARLKSDPAI
RAKVKSTEAA VAEGRVTPAI GADQIAELLA