Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3540 |
Symbol | |
ID | 3911342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4051779 |
End bp | 4052123 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637885442 |
Product | hypothetical protein |
Protein accession | YP_487146 |
Protein GI | 86750650 |
COG category | [S] Function unknown |
COG ID | [COG2361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.279096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.479149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGA GCGTTGACGA TCGCTTTCGC GATATCCTCG ATGCCATCGC CGAACTCGAC GATCTCCTCC AAGGCTACGA CTTCGAGAAG TTTTCCCGCG AGCGACGTAC CAGACTTCTG ACCGAGCGCT TGCTGGAGAT CGTCTGCGAA GCCTCGCGCA GCATTCCAGA TGCAATCAAG CAAGGCGAAC CGACGATCGA CTGGCGCAGC ATGATCGACT TTGGCAATTT GTTGCGCCAT GCCTATCATT CGACGCGGGC GGATACGGTT TGGGAGATCA TTCGAAACCG ATTACCACCG CTGCAAGCGT TCGCTGAACG TCGTCTTCAT CAATCAGGCG AGTAG
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Protein sequence | MPPSVDDRFR DILDAIAELD DLLQGYDFEK FSRERRTRLL TERLLEIVCE ASRSIPDAIK QGEPTIDWRS MIDFGNLLRH AYHSTRADTV WEIIRNRLPP LQAFAERRLH QSGE
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