| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3536 |
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| Symbol | |
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| ID | 3911338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4046874 |
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| End bp | 4048745 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885438 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_487142 |
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| Protein GI | 86750646 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0287465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.381464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTG CAATCAAAGA CTTGCCGCTC GCCGCCGAAT TCGCTCCGGC CGGCTATGAC
GACTGGCGCA AGCTCGCCCT CGGCGTGCTG AAGGGCGCGC CGTTCGAAAA ACTGCAAGGC
AAGACCCCGG ACGGCCTCCC GCTCGAACCG ATTTATCCGC GTGCGATCAA TGCCTTACCG
GTCGCCGGCC GGCCCCTCGG GGCGCCCTGG CAGATCGTCC AGCGGGTCGA CCATCCCGAC
GCGGCCGAAG CCAACAAGCA GGCGCTGCAC GATCTCGAAA ACGGCGCCAC CGGCCTCGCG
CTGGTGTTCG CCGGCAGCGT CGGCGGCCGC GGCTTCGGCC TGCCGCCGAC CCGGGAGGCG
ATCGAGAAAG CGTTGCAGGA CGTGCATTTG GACGCCGGTA TCGGCATCGA GCTGCAATTC
GCCCCGGAAT CCTGCGACGT CGTTCGCCAC CTCGTCGAGT TGATCAAGCG CCGCGGCACC
GACCCGGCCG CCTGCGACAT CCGCTTCGGC ATCGACCCGA TCGGCGCCCG CGCCGTCCGC
GGATCGAGCC CCACCGACTG GAGCGAGATC GCGCGCGGCA TTGCCGAAGT TGCGAGAAAC
CTCTGTGCCG CAGGCTTCAA AGGCCCGTTC CTCGCCGCCG ACGGCCGCGT CGTGCACGAC
GCCGGCGGCT CCGAAGCGCA GGAACTCGCC TACGTCCTCG CCTCCGCCAT CGCGTATCTG
CGCGCACTGG AAGCCGCCGC CGTGCCGCTC GATCAGGCCC GCGGCATGAT TTTCGCGCGC
CTCAGTGCCG ACGCCGACCA GTTCCTGACG CTGGCGAAAT TCCGCGCGCT GCGCGTGCTG
TGGGCGCGCA TCGAACAGAG CTGCGGCCTC GCGCCGAAGC CGCTGTTCGT CGCCGCCGAA
ACCGCGTGGC GGATGCTGAC GCAACGCGAT CCCTCGGTGA ACATGCTGCG CGCCACGGTC
GCGACCTTCT CGGCCGCGCT CGGCGGCGCC AATGCGCTCG CGGTGCTGCC GCACACGCTG
GCGCTCGGCC TGCCCGACGC CTTGGCGCGC CGCATCGCCC GCAACACCCA ACTGGTGCTG
CTCGAAGAGT CGAACCTCGA AAAAGTCGCC GATCCCGCCG CAGGATCGGG CGGCATCGAG
GCGCTGACGC ACGAACTCTG TGACGCCGCG TGGACGCAGT TTCAGGCCAT CGAGCAGGCC
GGCGGCGTGT TCGCCGCGCT CGCCGCCAAT CTGATCCAGC CCAAGATCGC AGCGACCCGC
GCCGTGCGCG ACAAGGCCAT CGCCAAGCGC CGCGACGTGC TGACCGGCGC CAGCGAATTC
CCCAACCTGC ACGAGGCCCG CGCCACCGTG CTCGACGCCG AGCCGATCGC GGTCCCCACT
TTCGGCGAGG CCAAGATCAG CTTCGAACCG CTGACTCCGC TGCGGCTCGC AACGCCGTTC
GAAGTGCTGC GCGACAAGTC GGACGCCGTG CTGGCGCGCA AGGCAGCACG GCCGCAAATG
TTCCTCGCCA ATCTCGGCAC GCCGGCGGAT TTCACCGCAC GCGCGACGTT TGCGAAGAGC
TTCTTCGAGA CCGGCGGCAT CGAGGCGATC GACACCGAAG GCTTCACCGA TCCCGCGGCG
CTGGCGGCGG CGTTCAAGGC CTCGGGCGCG GTGTTCGCCT GCCTGTGCTC TTCGGACAAA
GCCTATGCGG CTCATGCTGC GGCGGCCGCG CAGGCGCTGC GCGAAGCCGG CTGCGGGCGG
ATCTATCTCG CCGGCCGCCC CGGCGAGCTG GAAGCGAGCC TGCGCGAGGC CGGCGTACAC
GACTTCATCT TCGCCGGCGG CGATGCGCTG GCGATGCTGA ACGACGCCTG GCAGCGAATC
GAGGCGGCAT GA
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| Protein sequence | MSSAIKDLPL AAEFAPAGYD DWRKLALGVL KGAPFEKLQG KTPDGLPLEP IYPRAINALP
VAGRPLGAPW QIVQRVDHPD AAEANKQALH DLENGATGLA LVFAGSVGGR GFGLPPTREA
IEKALQDVHL DAGIGIELQF APESCDVVRH LVELIKRRGT DPAACDIRFG IDPIGARAVR
GSSPTDWSEI ARGIAEVARN LCAAGFKGPF LAADGRVVHD AGGSEAQELA YVLASAIAYL
RALEAAAVPL DQARGMIFAR LSADADQFLT LAKFRALRVL WARIEQSCGL APKPLFVAAE
TAWRMLTQRD PSVNMLRATV ATFSAALGGA NALAVLPHTL ALGLPDALAR RIARNTQLVL
LEESNLEKVA DPAAGSGGIE ALTHELCDAA WTQFQAIEQA GGVFAALAAN LIQPKIAATR
AVRDKAIAKR RDVLTGASEF PNLHEARATV LDAEPIAVPT FGEAKISFEP LTPLRLATPF
EVLRDKSDAV LARKAARPQM FLANLGTPAD FTARATFAKS FFETGGIEAI DTEGFTDPAA
LAAAFKASGA VFACLCSSDK AYAAHAAAAA QALREAGCGR IYLAGRPGEL EASLREAGVH
DFIFAGGDAL AMLNDAWQRI EAA
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