Gene RPB_3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3535 
Symbol 
ID3911337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4046236 
End bp4046727 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID637885437 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_487141 
Protein GI86750645 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0606357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.285704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG CGCTGATCGC GCTCGGCGGC AATGTCGGCG ACGTCCGCGC GACGTTCGAC 
AAGGCGATCG CCAATATCTG CGGCATGACG CAGGGCGAAC TGCTCGCCCG CTCGTCGGAC
TACGCGACCC CGCCCTGGGG CGACGAACAG CAGGAGCGCT TCGTCAATGC CTGCGTGGCG
ATCGACACCG CGCTCGATCC GCACGCGTTG TTATTTACGC TGCACAAGAT CGAGAAGCGC
TTCGGCCGCG ACCGCGCGCA GGAGCGCCGC TGGGGTCCGC GCACGCTCGA CCTCGATCTG
CTGAGTTACG ACGATGCGGT GATCAATCAG CCCGGCCTGA CGCTGCCGCA TCCGCGTCTG
TTCGAGCGCG CCTTCGTGCT GGTGCCGCTG GTCGAGATCC GGCCGGACGG ATTAGTCGGC
GGCCGATCGC TGCAAGACGC CCTCGCTGGT CTGTCCACCG CCGGGATCGA GCGGCTGCCG
GACCGCGTCT GA
 
Protein sequence
MAEALIALGG NVGDVRATFD KAIANICGMT QGELLARSSD YATPPWGDEQ QERFVNACVA 
IDTALDPHAL LFTLHKIEKR FGRDRAQERR WGPRTLDLDL LSYDDAVINQ PGLTLPHPRL
FERAFVLVPL VEIRPDGLVG GRSLQDALAG LSTAGIERLP DRV