| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3527 |
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| Symbol | |
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| ID | 3911329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4035177 |
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| End bp | 4037462 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885429 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_487133 |
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| Protein GI | 86750637 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.650234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTACT TCAAGAACAA CAAGAATCGT TGGTGTGTCG GCGTGGCGAC GAGCGTCGTG
TCGATGTGCC TGACTGGTGC GGGGATCTCG GAAGGCCGCG CACAGAGCAC GGAACCGCGG
GTGCTGCCGC CGGTGTCGGT CGATGCGCCG CAACAGCGCG CACGCACCAC CCGCGTCACG
CCGCAGCGCG CCGCTGCGCC GCGCGCCGCG CGGGTGACGC CGCGGCAGAC CGCCGAGCGG
CCGCCGGCCC CGGTGGCGCC GCCGACCATG GGCACCACGC GCACGATCGG CGCGCCGGCC
CCGGCCTATG CGGGCGGGCA GGTGGCGCAG GGCGGCACGC TCGGCCTGCT CGGCGCGACC
AGCGTGATGA ACACGCCGTT CTCGACGGTC AACTACACCT CGGAGTTGAT CGAGAACCAG
CAGGCGCGCA CCGCCGCCGA CACGCTGATC AACGATGCGT CGGTGCGCAC CACCACCGGC
GCCAACGGCT TCGACGACAC CTTCCAGATC CGCGGCTTTC CTGTCGCCGC CACCGACGTC
GGCCTCAACG GCCTTTACGG GCTCGCGTCG TCGCAGCGCG TGCCGGCGCA GATCATCGAG
CGGATCGAGC TCTTGAAGGG TCCCGGCGCG CTGATCAACG GCATCGCGCC GGGCAACAGC
ATCGGCGGCG GCATCAACAT CGTCACCAAG CGCGCCAGCG AGACCGATTT CTCGCGGCTG
ACGCCGTTCT TCATGAGCGC GGCCAGCTAC GGCCTGCATC TGGAGACCAG CCGGCGCTTC
GGCGCCAACA AGGAATGGGG CGTCCGCTTC AACGGCGTCG GCCGCAACGG CGAGGCCTCG
ATCGACGACG GAAATTTCCG CAGCGGCCTC GGCGCGCTGG CGATCGACTA TCGCGGTGAG
CGGTTCCGCT GGACCCTCGA CGCGTTCTCG CAGAACGACG ACACCGACAA TTTCCGTCCG
CAGGTCAGCC TGTCGTCGAT CGGCAACGTC ATTCCGGCGG CGCCGGACGC GCGCAGCAAC
TGGTACCCCG GCACGAAGTT GCGGCAGAAG GACAACACCA TCGCGACCGC GGCGGAATAC
GACCTGACCG ACTGGCTGAC CGCCTATGCC GGCGTCGGCT ATCGCGAGGG CTCGAACTAT
CAGACCTTCC CGTCCTCGGC GACGGCGGTC GACGCGCTCG GCAACTTCAC GGTGCAGAAC
AACTATTACG ATTCCTACAG CAAGACGGTG AGCGGCAATG TCGGGTTGCG CTCGCAGTTC
GACACCGGCT TCATCCGCCA CAAGTTGAAC TTCGTCTACA CCGGCTATCA GCAGGAGTAC
GGCTACGCCT ATATCATCGG CAACAGGGCG GCGTCGAACA TCTACAATCC GTCGCCGCTG
CCGAGCATCA CGCTGCCACG GACCGCGCCG CAGCACTCGG CCGACACCAC GCTGCAGAGC
GCCGCGGTGG TCGACACGAT GTCGTTCCTG AACGATACCA TTCTGCTGAC CGCTGGTGTC
CGCCAGCAGA ACGTCAAGCA GGACAGCTTC AGCATCACGA CGGGCGCGCT CACCAGCGGC
TACGACGCCA GCGCGACGTC GCCGCTCGCC GGCATCGTCG TCAAGCCGTG GCACAACGTG
TCGCTCTACG CCAACTACGC CGAAGGTCTC AGCCAGGGCA CGATCGTCAC CGGCACCTAT
GCCAACACCG GCACGGTGCT GGCGCCGTAC AAGTCGAAGC AGCAGGAAGC CGGCATCAAG
GTCGACTGGG GGCTGATCAC CACCACCGCG GCGGTGTTCC AGATCACCCG TCCGAGCCTG
ATCACGACGG CCGCGAACGA GCGGCTCTAC GACGGCGAGC AGCGCAACCG CGGCGTCGAG
CTGAACGCCT ACGGCCTGAT CCTGCCGAAC CTGCGCGGCA TGGTCAGCGC GACCTTCGTC
AAGCCCGAGC TGACCAATCC CAGCGATCAG ACCCAGCGCG GCAACGACGC CGCCGGCGTG
CCGGACAAGA CGTTCTCGGC CGGTCTCGAC TGGGATACGC CGTGGGTGCA GGGCCTCTCG
CTCAACGGCC GCGTGATCTA CACCGGCAGC TCCTATCTCA CCACCGCCAA CACGGTGAAG
TTCCCGGACT GGACCCGGCT CGATATCGGC GCGCGCTACG CCACCACCGC GCTCACCGGC
AAGCCCGTCA CCTTCCGATT CAACATCGAG AACGTCACCG GCGAGAACTA CTGGCTCACC
ACCGGCACCT ACGTGACCGT CGGCGCGCCG CGCACCTACA TCCTCTCCGC GGCGTTCGAT
TTCTGA
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| Protein sequence | MSYFKNNKNR WCVGVATSVV SMCLTGAGIS EGRAQSTEPR VLPPVSVDAP QQRARTTRVT
PQRAAAPRAA RVTPRQTAER PPAPVAPPTM GTTRTIGAPA PAYAGGQVAQ GGTLGLLGAT
SVMNTPFSTV NYTSELIENQ QARTAADTLI NDASVRTTTG ANGFDDTFQI RGFPVAATDV
GLNGLYGLAS SQRVPAQIIE RIELLKGPGA LINGIAPGNS IGGGINIVTK RASETDFSRL
TPFFMSAASY GLHLETSRRF GANKEWGVRF NGVGRNGEAS IDDGNFRSGL GALAIDYRGE
RFRWTLDAFS QNDDTDNFRP QVSLSSIGNV IPAAPDARSN WYPGTKLRQK DNTIATAAEY
DLTDWLTAYA GVGYREGSNY QTFPSSATAV DALGNFTVQN NYYDSYSKTV SGNVGLRSQF
DTGFIRHKLN FVYTGYQQEY GYAYIIGNRA ASNIYNPSPL PSITLPRTAP QHSADTTLQS
AAVVDTMSFL NDTILLTAGV RQQNVKQDSF SITTGALTSG YDASATSPLA GIVVKPWHNV
SLYANYAEGL SQGTIVTGTY ANTGTVLAPY KSKQQEAGIK VDWGLITTTA AVFQITRPSL
ITTAANERLY DGEQRNRGVE LNAYGLILPN LRGMVSATFV KPELTNPSDQ TQRGNDAAGV
PDKTFSAGLD WDTPWVQGLS LNGRVIYTGS SYLTTANTVK FPDWTRLDIG ARYATTALTG
KPVTFRFNIE NVTGENYWLT TGTYVTVGAP RTYILSAAFD F
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