Gene RPB_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3517 
Symbol 
ID3911319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4025664 
End bp4026092 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID637885419 
ProductFe-S metabolism associated SufE 
Protein accessionYP_487123 
Protein GI86750627 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0960536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.75307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG ACGAAATCAG AGACAATTTC GCGCTGCTGG ACGATTGGGA CGATCGCTAC 
CGCTACGTGA TCGAACTCGG CCGCACGCTC GATCCGATGC CGGAGGACGA GCACTCCACC
GCCAACAAGG TCAATGGCTG CGCCAGCCAG GTCTGGCTGT CGCGCCGGCT GACGCACAAC
GCCGACAACC AGCCGGTGCT CAACTATCTC GGCGACAGCG ACGCCCACAT CGTGCGCGGG
CTGATCGCGA TCCTGCTGAC GCTGGTGTCC GGCCGTACGC CGCAGCAGAT CCTCGCCGCC
GAGCCGATCG CGGTGTTCGA CGAACTCGGC TTCCGCGAGC ACCTGACGCC GCAGCGCTCC
AACGGCCTGC GCTCGATGAT CGAGCGCATC AAAGCCGACG CCCACGCGAC CCTGGCCGCG
TCGAGCTGA
 
Protein sequence
MTIDEIRDNF ALLDDWDDRY RYVIELGRTL DPMPEDEHST ANKVNGCASQ VWLSRRLTHN 
ADNQPVLNYL GDSDAHIVRG LIAILLTLVS GRTPQQILAA EPIAVFDELG FREHLTPQRS
NGLRSMIERI KADAHATLAA SS