| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3505 |
|---|
| Symbol | |
|---|
| ID | 3911307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4012717 |
|---|
| End bp | 4013229 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637885407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_487111 |
|---|
| Protein GI | 86750615 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2983] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG TTCCCAAGAA GATTTCCCCC CAGGACGGGT TCTTCTGGAA AACCAAAACC
TTGGAAGAGA TGTCCCAGGC CGAATGGGAG AGCCTGTGCG ACGGCTGCGC GCGGTGCTGC
CTGGAGAAGC TCGAGGACGA GGATTCGGGG CGGATCTATT TCACCCATGT CGGCTGCCGG
CTGCTCGATG GCGACGCCTG CGCCTGCCAC GACTACGCCA ATCGCTCGGA ACGGGTGCCG
GATTGCGTCC GGCTGACGCC GGAGAACGTG CGCACGCTGA GCTGGCTGCC GCCGAGCTGC
GGCTATCGGC TGGTCGCCGA GGGCCGCGAT CTGTACTGGT GGCATCCCTT GATCTCCGGC
GATCCGAACA CGGTGCACGA CGCCGGGGTG TCGGTGCGCG GGCGCGTCGA GGCGACCGAG
ACCGAGGTCT CGGTCGAGGA CCTCGAAGAT CACATCGTCT CCTGGCCGGC CCTGCTGCCG
CGCCGCGCCA AGCTGAAGAA ACGGCCGGGC TGA
|
|---|
| Protein sequence | MTAVPKKISP QDGFFWKTKT LEEMSQAEWE SLCDGCARCC LEKLEDEDSG RIYFTHVGCR
LLDGDACACH DYANRSERVP DCVRLTPENV RTLSWLPPSC GYRLVAEGRD LYWWHPLISG
DPNTVHDAGV SVRGRVEATE TEVSVEDLED HIVSWPALLP RRAKLKKRPG
|
|---|
| |