Gene RPB_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3503 
Symbol 
ID3911305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4009425 
End bp4010168 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID637885405 
Producthypothetical protein 
Protein accessionYP_487109 
Protein GI86750613 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.408411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT TGATCATCCT CGCTCTCGCC GGCCTGTGGG CCGGCATGCA GAACACGCTC 
GCCGGTGGCG GCTCGTTTGT CACGCTGCCG GCGCTGCTGC TGACCGGGCT GTCGCCGCTG
GCGGCCAACA TCACCTCGAC GGTGGCGCTG TTTCCCGGGC AGCTGGCCTC GGGCTACGCC
GGCCGGACGA TGGTCCAGGG TGTCGGCCGG CTGTCGTTTG TCTGGCTGGT CGTCATCAGC
CTGGTCGGCG GCGCGCTCGG CGCGCTGCTG CTGCTGATCA CGCCGCCGAC CATCTTCGCG
CGGATGATGC CGTGGCTGGT GCTGTTCGCG ACGCTGATTT TCGCCTGGGG CAGCTTTCGG
CGCAAGCCGC CGGCGCAGGC CAAGGAGATC AGCCTGCCGC TGCTGGTCGG CGCGCAGTTC
ATGATCGCGA TCTATGGCGG CTATTTCGGC GGCGGCATCG GCTTTCTGAT GATGGCGGCG
CTGTCGATCG CCGGCATGAA GCCGCGCAAC GGCAGCGCCA CCAAGAACGC GCTCGCCGCG
GCGATGAACG CGTCGGCGGT GGCGATGTTT GCGTTCTCCG ACGACGTGAA ATGGCTGGAG
GCGCTGGTGC TCGCCGGCTC GTCCACCGTC GGCTATCTCG CCGGCGTCTG GGTGCTCCGC
CGCGTCAACG AGCAATGGCT GCGGTTCGGC GTCATCGTGC TCGGCGTGGC GCTGACGGCG
GGGCTGTTCT GGCGGCAGTT TTAG
 
Protein sequence
MTALIILALA GLWAGMQNTL AGGGSFVTLP ALLLTGLSPL AANITSTVAL FPGQLASGYA 
GRTMVQGVGR LSFVWLVVIS LVGGALGALL LLITPPTIFA RMMPWLVLFA TLIFAWGSFR
RKPPAQAKEI SLPLLVGAQF MIAIYGGYFG GGIGFLMMAA LSIAGMKPRN GSATKNALAA
AMNASAVAMF AFSDDVKWLE ALVLAGSSTV GYLAGVWVLR RVNEQWLRFG VIVLGVALTA
GLFWRQF