Gene RPB_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3500 
Symbol 
ID3911302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4004725 
End bp4005261 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content73% 
IMG OID637885402 
Producthypothetical protein 
Protein accessionYP_487106 
Protein GI86750610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG GTGCCATGCA AGACGTCGTT CGATTCGTGA CGAGAGCCGC CCTGCTGTCC 
GCCGCGTTCG CCGTCGTCGG CCTGCCCGGC CCCGCAGGCG CGCAATCGGG CAGCGCCGGC
GGCAGCATCG GCAACACCGA GAAGTCGCTG TCCGGAACGC GCGCGACGCC GCGGACCGTC
GAGCCGGCCA AGCCGGCACG GCGCAGCAAG CCCGCCGCCG AGACGACACG CCCCGCCGCA
CGCAAGAGCG GTGGGGGCGG TGCCGGTGCG GGCGGCGGCA ATTTCGACGG CGCATGGTCG
GTCGCGAGCG TCGGCACACC CTGCGGCGGC GCCACCGAGG CGATCGTCAT CACCAGCGGC
AGGATCATCG GACAATACAC CTCGGGCCGG GTCGCGCCGA ACGGCGCCAC GACCGGCGCG
GGCTCTGCCA ATGGCATCAG TTGGACCAGC TCCGGCCGTT TCTCGGCCCG CAGCGGCTCC
GGATCGTTTC GACGCTCCGA CGGCTGCGTC GGCCGCTGGA CCGCGTCGAA GCAGTAG
 
Protein sequence
MELGAMQDVV RFVTRAALLS AAFAVVGLPG PAGAQSGSAG GSIGNTEKSL SGTRATPRTV 
EPAKPARRSK PAAETTRPAA RKSGGGGAGA GGGNFDGAWS VASVGTPCGG ATEAIVITSG
RIIGQYTSGR VAPNGATTGA GSANGISWTS SGRFSARSGS GSFRRSDGCV GRWTASKQ