| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3492 |
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| Symbol | |
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| ID | 3911294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3995695 |
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| End bp | 3997374 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637885394 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_487098 |
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| Protein GI | 86750602 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.948629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGTC GCCGTTCGAA GAAGAACCCT GATGCGCTGG CGCTGATGGC GGCCAAGGCG
GTCCGAGCCA ACATCATGGT GTCGGACGCC AATCTCGACA TCGTCTACAT GAACGATGCG
GTGACGTCGC TGTTGCGCGA AGCCGAATCC GACATGAAGA AGGAAATGCC GAACTTCAAC
GTCGACACGC TGGTCGGCAC CAATATTGAC GGCTTCCACA AGAATCCGAG CCATCAGCGG
CAGATGCTGA AGAGCCTCAG TTCGGTGCAT CGCGCCACCA TCAAGGTCGG GCCGCGGAGC
TTCGATCTGG TGGCGACGCC GCTGAACAAT GCCGACGGCA GCCGCGCCGG CGTCGTGGTC
GAATGGGCCG ACGCCGCGAT CCGGCTGCAG AACGTCGATT TCGCCGGGCA GGTCGAAGCG
ATCGGCAAGT CGCAGGCGGT GATCGAATTC AACATGGACG GCACCGTCCG AACCGCCAAC
GAGAATTTCC TGAGGACTCT CGGCTACTCG CTGGCCGAGA TCCAGGGCAA GCACCACAGC
ATGTTCGTCG AGCCGTCGAT GCGCGGCACG ACCGCCTATC GCGAATTCTG GGCGGCGCTG
AACCGCGGTG AATTCCAGGC CGCCGAATAC AAGCGGATCG GCAAGGGCGG CAAGGAAGTC
TGGATTCAGG CGTCCTACAA TCCGATCCTC GACGAGAAGG GCAAACCCGC CAAAGTGGTG
AAATTCGCCA CCGACGTCAC CGAGCAGAAG CTGAAGAACG CGGATCTCGC GGGGCAGATC
GAGGCGATCG GCAAGTCGCA GGCGGTGATC GAGTTCAACA TGGACGGCAC CATCATCAAC
GCCAACGACA ATTTCCTGAA CGCGCTCGGC TATACGCTGG CCGAGATCAA GGGCAAGCAC
CACAGCCTGT TCGTCGATCC GCACGAGCGC GAGGGTGCGG CGTATCGCGA ATTCTGGGCG
TCGCTCGGCC GCGGTCAGTA TCAGGCGGCG GAATACAAGC GGATCGGCAA GGGGGGCCGC
GAAGTCTACA TCCAGGCCTC CTACAATCCG ATCCTCGATC TCAACGGCCG GCCGTTCAAG
GTGGTGAAAT ACGCCACCGA CGTCACCCAG CAGGTGCTCG CCCGGATGGG CAATGAGCGC
GTGCGCAGCA TGATGGAAAC CGTCGCCGCC GGCGCCGAGG AACTCAACGC GTCGGTCCGC
GAGATCTCCG CGACGATGAC CAAGTCGCGC GAGACCGCGG CCGGCGCCGT CGAACGCGTG
GCGAATGCCG ACGCTCAGGC GCAGCGCCTC ACCAGCGCGG CGCAGGCGAT GAGCGGCATC
GTCGAACTGA TCAACAACAT CACCGGGCAG ATCAATCTGC TCGCGCTCAA CGCCACGATC
GAATCGGCGC GGGCCGGAGA GGCCGGCCGC GGCTTCGCCG TGGTCGCCGC CGAGGTCAAG
AACCTCGCCA ACCAGGCCAA GCAGGCCACC GACAAGATCG GCGAGGAAAT CGGCAGCCTC
AACATTATCT CGGGCGACGT CGCCGGCGCG CTGAACGCGA TCAAGGAAGC GATCACCCAT
GTCAGCGAAT ATGTGACGTC GACCGCGGCT GCGGTCGAGG AGCAGAGCAC GGTGACCAGC
GAAATGTCGA CAAGCATGCA ACGTGCCGCC GCCGAGGCCG CCAGCATCGC GGCCGGCTGA
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| Protein sequence | MFGRRSKKNP DALALMAAKA VRANIMVSDA NLDIVYMNDA VTSLLREAES DMKKEMPNFN
VDTLVGTNID GFHKNPSHQR QMLKSLSSVH RATIKVGPRS FDLVATPLNN ADGSRAGVVV
EWADAAIRLQ NVDFAGQVEA IGKSQAVIEF NMDGTVRTAN ENFLRTLGYS LAEIQGKHHS
MFVEPSMRGT TAYREFWAAL NRGEFQAAEY KRIGKGGKEV WIQASYNPIL DEKGKPAKVV
KFATDVTEQK LKNADLAGQI EAIGKSQAVI EFNMDGTIIN ANDNFLNALG YTLAEIKGKH
HSLFVDPHER EGAAYREFWA SLGRGQYQAA EYKRIGKGGR EVYIQASYNP ILDLNGRPFK
VVKYATDVTQ QVLARMGNER VRSMMETVAA GAEELNASVR EISATMTKSR ETAAGAVERV
ANADAQAQRL TSAAQAMSGI VELINNITGQ INLLALNATI ESARAGEAGR GFAVVAAEVK
NLANQAKQAT DKIGEEIGSL NIISGDVAGA LNAIKEAITH VSEYVTSTAA AVEEQSTVTS
EMSTSMQRAA AEAASIAAG
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