Gene RPB_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3434 
Symbol 
ID3911236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3932872 
End bp3933840 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID637885337 
Productalcohol dehydrogenase 
Protein accessionYP_487041 
Protein GI86750545 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0491212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCT ATGTTTACGG CGCCGATGGC GCCGCCATCA CCGAGATCGA CAAGCCGGCG 
CCGAAGGGGC CGCAGGTCCT GGTCCGGGTC CGCGCCTGCG GGCTCAATCG CGCCGACCTC
GGAATGACCA AGGGCCACGC CCACGGCGCG GCCGGTGGCG TCGGCGCGGT GCTCGGCATG
GAATGGGCCG GCGAGATCGA GGCGGTCGGC GACGAGGCCT ATGGCTGCGA GGTCGGCCAG
CGGGTGATGG GCTCCGGCAC AGCCGCGTTC GGGGAATCCA CCCTCGCCGA TCACGGCCGG
CTGTTTCCGA TTCCGGACGG CATCGGCTTC GAGGAAGCCG CGACCCTGCC CGTCGCGCTC
ACCACGATGC ACAACGCGCT GATCGCGGTC GGCAAGCTGC GCGCCGGCCA GGCCGTGCTG
ATCCAGGGCG CAAGCTCCGG CGTCGGGCTG ATGGCAATGC AGATCGCGAA GTTGAAAGGC
GCGAGACTGG TGATCGGGTC GTCGACCGAC AAACACCGCC GCGACCGGCT GAGCGAATTC
GGCGCCGATC TCGCGATCGA TTCGTCGGAT GCGGGCTGGG TCGATCAGGT GCTCGAAGCC
ACCGGCGGCG CCGGCGTCGA TCTGATCATC GACCAGATCT CCGGCAAGGT CGCCAACCAG
AACCTCGCCG CGGCGCGCGT GCTCGGCCGC ATCGTCAATG TCGGCCGGCT CGGCGGCACC
CACGCCGATT TCAACTTCGA CCTGCACGCG GCGCGCCGGA TCGATTATGT CGGCGTCACC
TTCCGCAGCC GCAGCATCGA GGAGATCCGC GAAATCTTCC GCCAGGTCCG CGGCGACATC
TGGCCGGCGG TCGAATCCCG CAAGCTGCGC CTGCCGATCG ACCGCGTCTT CCCGTTCTCG
GAGATCGGCG AGGCGTTCGC TCACATGGAA GCGAACCGTC ACCTCGGTAA GATCGTGGTG
ACGTTCTGA
 
Protein sequence
MKAYVYGADG AAITEIDKPA PKGPQVLVRV RACGLNRADL GMTKGHAHGA AGGVGAVLGM 
EWAGEIEAVG DEAYGCEVGQ RVMGSGTAAF GESTLADHGR LFPIPDGIGF EEAATLPVAL
TTMHNALIAV GKLRAGQAVL IQGASSGVGL MAMQIAKLKG ARLVIGSSTD KHRRDRLSEF
GADLAIDSSD AGWVDQVLEA TGGAGVDLII DQISGKVANQ NLAAARVLGR IVNVGRLGGT
HADFNFDLHA ARRIDYVGVT FRSRSIEEIR EIFRQVRGDI WPAVESRKLR LPIDRVFPFS
EIGEAFAHME ANRHLGKIVV TF