Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3432 |
Symbol | |
ID | 3911234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3930758 |
End bp | 3931543 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637885335 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_487039 |
Protein GI | 86750543 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0464074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAAAT GGGTTCGCTT CCGCGCCGAT GGCGCGATCG GCTTCGGCAC CATCGCGCAT TCCGACATCG CGGTGCATGA CGGCGAGATG TTCGGCGCCA ACACGCCGAC CGGCCGGACG CTGCAGCTCG GCGACATCGA ATTGCTGGCG CCCTGCGCGC CCGGCAAGAT CATCGGGCTG TGGAACAATT TTCACGCGCT GGCCGCCAAG CTCAATCAGT CGATCCCGCC CGAGCCGTTG TACTTCCTGA AAGCGACCAC CAGCGTCGCC GCGCATGGCG CCGTGGTGAA CCGTCCCGCC TCCTACGACG GCAAGGTCGT CTACGAAGGC GAACTCGGCA TCGTCATCGG CAAACGGGCG AGCGGCATTT CCGAAGCCGA GGCGGCCGCG CACATCTTCG GCTACACCTG CGTCAACGAC ATCACCGCGG CCGACATCCT CAATCGCGAC CCGAGCTTCC CGCAATGGGC GCGCGCCAAG AGCTTCGACG GCTTCGGCCC GTTCGGCCCG GCGATCGCCA CCGGTCTCGA TCCCGCCACG ATGTCGATCC GCACCCTCCT CAACGGCGCC GAGCGGCAGA ATTACCCGGT CGCCGACATG GTGTTCCAGC CGCACAAGCT CGTCAGCCTG CTGTCGCACG ACATGACGCT GGAGCCCGGC GACCTGATCT GCTGCGGCAC CTCGGTCGGC GTCGGCGTGA TGAAGGAGGC CGTCAACAGC GTCACCATCG CGATCGAGGG CATCGGCGAA CTGCACAACG AATTCCGTCA GGCGGCGAAA GCGTAG
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Protein sequence | MTKWVRFRAD GAIGFGTIAH SDIAVHDGEM FGANTPTGRT LQLGDIELLA PCAPGKIIGL WNNFHALAAK LNQSIPPEPL YFLKATTSVA AHGAVVNRPA SYDGKVVYEG ELGIVIGKRA SGISEAEAAA HIFGYTCVND ITAADILNRD PSFPQWARAK SFDGFGPFGP AIATGLDPAT MSIRTLLNGA ERQNYPVADM VFQPHKLVSL LSHDMTLEPG DLICCGTSVG VGVMKEAVNS VTIAIEGIGE LHNEFRQAAK A
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