| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3407 |
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| Symbol | |
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| ID | 3911209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3892806 |
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| End bp | 3894008 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637885310 |
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| Product | patatin |
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| Protein accession | YP_487014 |
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| Protein GI | 86750518 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.607013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATGC GTCACATTCC TCGGCCGTTG GTCGTGCCTC TGATGATCGC GTTGAGTTCG
CTGCTGGCGG CTTGCGCGTC GAAGCCGCGG GTGCCGTATA CCGCCGCCGA AGCTTCCACC
GCACGGGTGC TCGATCTCAA GGATCTGCGG CGCTATGCGG ACGAGCCGGC GTCGGCGTTC
CGGGACGACA AGATCATTTC CGGGCCGCGC GCCTATCTGG CGCTGTCCGG CGGCGGCGCC
GACGGCGCCT ATGGCGCGGG CGTGCTCAAC GGATGGACCG ACGCCGGAAC CCGGCCGTCG
TTCTCGATCG TCTCGGGGGT CAGCACCGGT GCGCTGATCG CGCCGTTCGC GTTCCTCGGC
CCGCAATACG ATCCGACCTT GCGCGAGTTC TACACCAGCG GCATCGCCGA GAGTCTGCTC
GACTCGCCGA ATCCGTTCAA CGCGATCTTC GGCTCGGGAT TGTTCGGCAA CACCCGGCTG
CGCGAACTGG TCGCGCAATA CATCAATGCG GATTTCATGG CCGCGGTCGC GGACGAGCAC
GCCAAGGGCC GGATGCTGTT CGTGGTGACG ACCAATCTGG ACTCCCAGCG CGCCGTGATC
TGGAACATGG GCCGGATCGC GTCGCTGCGC TCGATGCAGG CGCTCAACCT GTTCCGGGAC
GTGGTGGCGG CATCGGCCAG CCTTCCGGCG ATTTTCCCGC CGATGCTGGT GAACGCCGAG
TCCAACGGCG TCCGTTTCCA GGAGATGCAT GTCGATGGCG GCGTCACCGC CCCGGTCCTG
ACGTTGCCGG AGGCCTATCT GCTGCGCAAC GCGGCGTGGG GCAAGTCGCT CGACCTGCAG
CTCTACATCC TGATGAACAA CAAGATCGAA CCCGAATTCC AGGTGGTTCC GAACCGGACC
CTGGAGATCG CGGCGCGGTC GTCGTCGACG CTGGTCAAGG CGCAGACCAA GTCGATCCTC
TACAGCACCT ATGACGCCGC CCGCCGCAAC AAATACGGCT TCAACCTGAC CTACATCGAA
AGCGATCGGC CGGCGTCGCC CTCTGCGGGC TTCGACACCG CCTATATGCG CGACCTGTTC
CAATACGGCT ACGACCGGGC GAGGTCGGGC CATGCGTGGT CGAAATCGCC TCCTGCGGAA
ACTCCGACCG CGGTTCCGGT CGCCGAGGCA AAACCCGTCC GGCGACTGGC CGGCGCCAAC
TGA
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| Protein sequence | MVMRHIPRPL VVPLMIALSS LLAACASKPR VPYTAAEAST ARVLDLKDLR RYADEPASAF
RDDKIISGPR AYLALSGGGA DGAYGAGVLN GWTDAGTRPS FSIVSGVSTG ALIAPFAFLG
PQYDPTLREF YTSGIAESLL DSPNPFNAIF GSGLFGNTRL RELVAQYINA DFMAAVADEH
AKGRMLFVVT TNLDSQRAVI WNMGRIASLR SMQALNLFRD VVAASASLPA IFPPMLVNAE
SNGVRFQEMH VDGGVTAPVL TLPEAYLLRN AAWGKSLDLQ LYILMNNKIE PEFQVVPNRT
LEIAARSSST LVKAQTKSIL YSTYDAARRN KYGFNLTYIE SDRPASPSAG FDTAYMRDLF
QYGYDRARSG HAWSKSPPAE TPTAVPVAEA KPVRRLAGAN
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