Gene RPB_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3400 
Symbol 
ID3911202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3886802 
End bp3887269 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID637885303 
Productmanganese transport regulator MntR 
Protein accessionYP_487007 
Protein GI86750511 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGA CGGCTCGCCA GAAGCCTGCG CCGCACGACG GGATCAGCAC CGAACTGCCG 
TCCGAGCACA CCCAGGCGCG GCGCTTCGGC AAGACGCGGT CGGCGCAATC GACCGCGTTG
TTCGAGGACT ATGTCGAGTT GATCGCCGAT CTGCTGACCG GCGTGGGCGA AGCGCGGCCG
ACCGACATCG CGCGGCGGCT CGGGGTGTCG CACGCGACCG CGATCAAGGC GATCTCGCGC
TTGAAGCGGG CCGGATTGGC GACCTCGCGC CCTTATCGGG GTGTCTTTCT CACCGAGAAC
GGGCATGCGT TGGCCGAAAA AGTCCACACC CGCCATCGGC TCGTGGTCGA CCTGCTGATT
GCGGTCGGCG TTCCCGCCGA AGCCGCGGAG GCCGATGCCG AGGGGATGGA GCACCACGTC
TCGGATGCGA CCCTGGCGGC GTTCGCGCAA TTTCTCGAGT CGCGGTGA
 
Protein sequence
MPLTARQKPA PHDGISTELP SEHTQARRFG KTRSAQSTAL FEDYVELIAD LLTGVGEARP 
TDIARRLGVS HATAIKAISR LKRAGLATSR PYRGVFLTEN GHALAEKVHT RHRLVVDLLI
AVGVPAEAAE ADAEGMEHHV SDATLAAFAQ FLESR