| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3399 |
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| Symbol | |
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| ID | 3911201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3885700 |
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| End bp | 3886698 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885302 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_487006 |
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| Protein GI | 86750510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.829022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCA CACAGATCCG CAGCTTCAGA TTTTGTACCG CGCCGATGAT GGAGTGGACC
GATTCGCGCT GTCGCGTATT CCATCGTCTG CTGACGAAGC GGGCGCGGCT GTACACCGAG
ATGGTGACCA CCGGCGCGGT GATCCACGGC GATCGGCAGC GCTTGCTCGG CTTCGATGCG
TCCGAACATC CGGTGGCGCT GCAGCTCGGC GGCTCCGATC CGGCCGCGCT CGCGACCGCC
GCGAAGATCG GCGAGGATTT CGGCTACGAC GAGATCAACC TCAATGTCGG TTGCCCGTCG
GACCGGGTGA AGGAGGGCCG GTTCGGCGCC TGCCTGATGG CGGAGCCCGA GCTGGTCGCC
GACGGCGTCG CGGCGATGAA GCGCGCGGTG GAGATCCCGG TGACGGTGAA ATGCCGGATC
GGCATCGACG ATCAGGATCC GGAGGCGGCG CTCGATACGC TGGCGCGCGG TGTGGTCGCG
GCCGGCGTCG ATGCGCTGAT CGTGCATGCC CGCAAGGCCT GGCTCAACGG CCTGTCGCCG
AAGGAAAACC GCCACGTCCC GCCGCTCGAC TACGATCGCG TGTACCGGCT GAAACGGGCG
CTGCCCGATC TGCCGATCGT CATCAATGGC GGCATCGGCA GTATCGCCGA GGCGAAGCTG
CATCTGGCGC ATGTCGATGG CGTGATGCTC GGCCGCGCCG CGTATCAGGA GCCGTGGCGG
CTGCTCGAGG TCGATCCGGA GCTGTTCGGC GAGGCCGCGC CTTACGCGAC GATGAAAGAC
GCGCTCGAGG CGCTGATGCC GTATATCGAG GACCAGCTCG CACAGGGCGT GCGGCTGCAT
GCGATCACCC GGCACCTGAT CGGCGCGTAT CAGGGCGTGC CCGGCGCGCG CGCGTTCCGG
CGCTATCTGT CGGAATTCGG CGTCAAGCCC GACGCCGACG CCAGCGTGTT GCGCAAGGCG
ATGGTGGCGG TCGAGCAGCG CGCCGCCGAG GCGGCGTGA
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| Protein sequence | MQTTQIRSFR FCTAPMMEWT DSRCRVFHRL LTKRARLYTE MVTTGAVIHG DRQRLLGFDA
SEHPVALQLG GSDPAALATA AKIGEDFGYD EINLNVGCPS DRVKEGRFGA CLMAEPELVA
DGVAAMKRAV EIPVTVKCRI GIDDQDPEAA LDTLARGVVA AGVDALIVHA RKAWLNGLSP
KENRHVPPLD YDRVYRLKRA LPDLPIVING GIGSIAEAKL HLAHVDGVML GRAAYQEPWR
LLEVDPELFG EAAPYATMKD ALEALMPYIE DQLAQGVRLH AITRHLIGAY QGVPGARAFR
RYLSEFGVKP DADASVLRKA MVAVEQRAAE AA
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