| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3392 |
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| Symbol | |
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| ID | 3911194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3877125 |
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| End bp | 3878213 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885295 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_486999 |
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| Protein GI | 86750503 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.354915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC GTGACTTTCT GAAAGTATCA GCAACCGGCG CCGCGGTCGC GGCGGTGGCT
TCGCCGGCGA TTGCGCAATC GTCCCCAGAG GTGAAGTGGC GGTTGACCTC GAGCTTCCCG
AAGTCGCTCG ACACCATCTA TGGCGGCGCG GAATATCTCG CGAAGCAGGT CGCCGAGATG
ACCGACAACA AGTTTCAGAT CCAGGTGTTC GCCGCCGGCG AAGTGGTCCC CGGCCTGCAG
GCGCTCGACG CGACCTCGAA CGGCACCGTC GAGATGTGCC ACACCGTGTC GTACTACTAT
GTCGGCAAGG ATCCGACCTT CGCGGTGTTC GCCGCGGTTC CGTTCGGCCT CAACGCCCGC
CAGCAGAATT CGTGGCTGTA CCAGGGCGGC GGCAACGAGC TCGCCAACGA GTTCTACAAG
AAGCACAACG TGGTCGGCTT CCCCTGCGGC AACACCGGCA CCCAGATGGG CGGCTGGTTC
CGCAAGGAGA TCAAGACCGT CGCCGACATG AGCGGCCTGA AGATGCGGAT CGGCGGCATC
GCCGGTCAGG TGCTGCAGAA GGTCGGCGTG GTGCCGCAGC AGATCGCCGG CGGCGACATC
TACCCGGCGC TGGAAAAGGG CACCATCGAC GCCGCCGAGT GGGTCGGCCC CTATGACGAC
GAGAAGCTCG GCTTCCAGAA GGTCGCGAAG TACTACTACT ATCCGGGCTT CTGGGAAGGC
GGCCCGACCG TCCACGCCTT CACCAATCTC GAGAAGTTCA ACGCGCTGCC GAAGAACTAT
CAGGCGATCC TCGCCAACGC GGCGGTGCAT ACCAACACCT GGATGAACGC GCGCTACGAC
ATGCTCAACC CGACCGCGCT GAAGCGGCTG GTGGCGAGCG GCACGCAGCT GCGTCCGTTC
TCCAACGAAA TCCTCGACGC CTGCCTCAAA TCGACCAACG AGCTGTGGGG CGAGATCTCG
GCCAAGAACG CCGACTTCAA GAAGGCGATC GACGCGATGC AGGCCTACCG CTCGGATCAG
TATCTGTGGT GGCAGGTCGC CGAATACACC TACGACAGCT TCATGATCCG CTCGCGCACC
CGCGGCTGA
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| Protein sequence | MKRRDFLKVS ATGAAVAAVA SPAIAQSSPE VKWRLTSSFP KSLDTIYGGA EYLAKQVAEM
TDNKFQIQVF AAGEVVPGLQ ALDATSNGTV EMCHTVSYYY VGKDPTFAVF AAVPFGLNAR
QQNSWLYQGG GNELANEFYK KHNVVGFPCG NTGTQMGGWF RKEIKTVADM SGLKMRIGGI
AGQVLQKVGV VPQQIAGGDI YPALEKGTID AAEWVGPYDD EKLGFQKVAK YYYYPGFWEG
GPTVHAFTNL EKFNALPKNY QAILANAAVH TNTWMNARYD MLNPTALKRL VASGTQLRPF
SNEILDACLK STNELWGEIS AKNADFKKAI DAMQAYRSDQ YLWWQVAEYT YDSFMIRSRT
RG
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