Gene RPB_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3388 
Symbol 
ID3911190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3872569 
End bp3873021 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID637885291 
Producthypothetical protein 
Protein accessionYP_486995 
Protein GI86750499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.130898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTT TCGTAGTCGT TGCTGCCGCG GGCCTGAGCC TGGCCGGCTG TTCGTCGTTG 
TCACTCGACG CGTTCAAGTC GGCGCCGCCG ACCGCCACCG TTCAGCTCGA GTCGGCCCCC
TCCGGCGCCA ATGCGGTCGC CTCCAGCGGC GAGAGCTGCA AGACGCCGTG TTCGATTACG
GTTGCGGCGA CCGATTTCAG CGTCACGTTC AGCATGGACA AGTTCCAGCC GGTCACGGTG
CCGGTTCAGG TCGTGGTGAC GCCCGGCGAC TTCACGACGT CGGCCACGGC AGCCGCCACG
CCGAATCCGG TGGTGGCCGA ATTGCAGCCG GTGAAACCGG TCCGCAAGCC GGTGAAGCGG
ATCAGGAAGC CCAAGCCCGC CGCGTCCGCG CCGGCGCCGG CGGAGTCCTC TCCGTTCCCG
AGTCCGGCGG CCGCCCCCGC TCCGGCACGC TGA
 
Protein sequence
MRRFVVVAAA GLSLAGCSSL SLDAFKSAPP TATVQLESAP SGANAVASSG ESCKTPCSIT 
VAATDFSVTF SMDKFQPVTV PVQVVVTPGD FTTSATAAAT PNPVVAELQP VKPVRKPVKR
IRKPKPAASA PAPAESSPFP SPAAAPAPAR