| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3362 |
|---|
| Symbol | |
|---|
| ID | 3911164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3845203 |
|---|
| End bp | 3845529 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637885265 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_486969 |
|---|
| Protein GI | 86750473 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00352544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGGCC AGGTTGAGGA TTTGACGCCG CAGGACGTCG CCAAAGGGGT CGCAGAGGGA
CGTTATCTGC TGGTCGACGT CCGCGAGCCG AACGAAGTGG CGGCGGAAGC CTATCCGGAC
GCGGTGGTGG TTCCGCTGTC GAGCTTCGAT CCGCGCCAGA TCCCCGATCC GAGCGGCAAG
CAGGTCGTGT TCGCCTGCCG CTCGGGTAAG CGCTCGGTGA CGGCCTCTCA GGCGGCGCAG
ATGTCAGGGC TCGCCTACAA CAAGCATCTC GCCGGCGGCA TCCTCGGATG GAAGGCGGCA
GGCCTGCCGA CCAAGCCGGG CGGCTGA
|
|---|
| Protein sequence | MVGQVEDLTP QDVAKGVAEG RYLLVDVREP NEVAAEAYPD AVVVPLSSFD PRQIPDPSGK
QVVFACRSGK RSVTASQAAQ MSGLAYNKHL AGGILGWKAA GLPTKPGG
|
|---|
| |