Gene RPB_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3356 
Symbol 
ID3911158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3837465 
End bp3838745 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID637885259 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_486963 
Protein GI86750467 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0464074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CGCACGACAA ATTCGGCAGG CCGATCGTGG TCGTCACCGG CATGGGCGTG 
GTTACATCAC TCGGCGCCGG CAAGACCGAC AATTGGGCCA AGCTCACGGC GGGCGAATCC
GGCATCCGCA CCATCACCCG GTTTCCGATC GACGGCCTCA AGACGACGAT GGCCGGCACC
GTGGACTTCG TCCCGGTCGA GCCGTTCTCC TCCACGGTGC TCGGCGAGAA GCTCGCCGAC
ATCGCCACCG AGGAAGCGAT CGCGCAGGCC GGCATCGGCC GCAAGGGCGA CTTCCCCGGC
CCGCTGTTTC TCGCGGTGGC GCCGGTCGAA CTGGAGTGGC AGCCGCGGCA GGAACTGGCG
CGCGCCACCG GCGCCAACAC CGCGATCGAC TACGACGCCC TGCTCCGCGT CAGCGGCGGC
GGACGCTTCG CCAACTATCA CCACCGCTTC CTGTTCGGAT CGGTCGCCGA TCATCTCGCC
GAAACGTTCG GCACCAAGGG CTCGCCGATC TCGCTGTCGA CCGCATGCGC CTCGGGCGCG
AGCGCGATCC AGCTCGGCGT CGAAGCGATC CGCCGCGGCG AGGCCGACGC CGCTTTGTGC
GTCGCGACCG ACGGCTCGGT CAACGCCGAA GCGCTGATCC GCTTCTCGCT GCTGTCGGCG
CTGTCGACCC AGAACGATCC GCCGCAGGCC TCTGCAAAGC CGTTCGCCAA GAATCGCGAC
GGCTTCGTGA TGGCGGAAGG CGCCGGCGCG CTGGTGCTGG AAAGCTACCA ATCCGCCGTG
GCGCGCGGCG CGGCGATTCT CGGCGTCGTC GCCGGCTGCG GCGAACTCGC CGACTCGTTT
CACCGCACCC GCTCGAGCCC CGACGGCAAG CCGATCATCG GCTGCATCAA GAAGACGCTC
GCCGACGCCG GCCTCGGCGT CGAGCAGATC GACTACATCA ATGCCCACGG CACCGGCACG
CCCGAAAACG ACAAGATGGA ATACAACGGC ATCTCCGCGA TGTTCGGCGA ACGCGCCTCG
ACGATTCCGG TGTCCTCGAA CAAGTCGATG GTCGGCCACA CACTGTCCGC CGCCGGTGCG
GTCGAGGCGA TCTTCTCGCT GCTGACGCTC GAGCATCAGC GAATCCCGCC GACCATCAAC
TACGACGTGC CCGACCCGGC GATCCCGCTC GACGTGGTGC CGAACAAGGC GCGCGACGCC
CGCGTCACCG CGGTGATGTC GAACTCGTTC GGGTTCGGCG GCCAGAACGC TTCCCTGATT
CTGACGCGCG AGCCGGTCTA G
 
Protein sequence
MTATHDKFGR PIVVVTGMGV VTSLGAGKTD NWAKLTAGES GIRTITRFPI DGLKTTMAGT 
VDFVPVEPFS STVLGEKLAD IATEEAIAQA GIGRKGDFPG PLFLAVAPVE LEWQPRQELA
RATGANTAID YDALLRVSGG GRFANYHHRF LFGSVADHLA ETFGTKGSPI SLSTACASGA
SAIQLGVEAI RRGEADAALC VATDGSVNAE ALIRFSLLSA LSTQNDPPQA SAKPFAKNRD
GFVMAEGAGA LVLESYQSAV ARGAAILGVV AGCGELADSF HRTRSSPDGK PIIGCIKKTL
ADAGLGVEQI DYINAHGTGT PENDKMEYNG ISAMFGERAS TIPVSSNKSM VGHTLSAAGA
VEAIFSLLTL EHQRIPPTIN YDVPDPAIPL DVVPNKARDA RVTAVMSNSF GFGGQNASLI
LTREPV