Gene RPB_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3350 
Symbol 
ID3911152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3833631 
End bp3834131 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID637885253 
ProductMgtC/SapB transporter 
Protein accessionYP_486957 
Protein GI86750461 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.412283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0394509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCCGT GGTGGGAGAT GTTGTTGCGC CTCGGCGTCG CCGCGGTGGC CGGCGGACTG 
ATCGGCCTCA ATCGCGACCT GCAGGGCAAG CCGATCGGGA TGCGGACGCT GGCGCTGGTC
GGCGTCGCCT CCGCGCTGCT GGTCGCCCTC GCCGACCAGA GCGCAGATCT CGACCACGTG
TCCGACCCGA CCAGCCGCGT GATTCAAGGC ATCCTCACCG GCATCGGCTT TCTCGGCGCC
GGCGTCATCG TCCACACCGG CGGCCGACAC GACGTGCACG GCTTGACCAC CGCAGCCTGC
ACCTGGCTGA CCGCCTGCAT CGGCATCGCC TGCGGCGCCG GACAATGGCC GGGGGTGCTG
GCCGCGATGG CGATCACCCT TGCCGTGCTG ATCGGCGGCC ACCGGCTCGA GGGCCTGCTG
CATCGCCTGC TCGGCGGCAA GGACTCGGAA GGCGGCGGCG ACGAGACCAA GAGCAAGGGC
TCGCCGGCGG TGGAGGATTG A
 
Protein sequence
MLPWWEMLLR LGVAAVAGGL IGLNRDLQGK PIGMRTLALV GVASALLVAL ADQSADLDHV 
SDPTSRVIQG ILTGIGFLGA GVIVHTGGRH DVHGLTTAAC TWLTACIGIA CGAGQWPGVL
AAMAITLAVL IGGHRLEGLL HRLLGGKDSE GGGDETKSKG SPAVED