Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3343 |
Symbol | |
ID | 3911145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3824536 |
End bp | 3824934 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885246 |
Product | putative AtsE |
Protein accession | YP_486950 |
Protein GI | 86750454 |
COG category | [N] Cell motility |
COG ID | [COG5622] Protein required for attachment to host cells |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.578122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0666927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTA TTCCGCACAA CGCACTGATC GTCGTCGCCG ACGGCGGCGG AGCGATTTTG CTCCGCAACA CCGGTAAGCC GGCCAGCGTC GTGCTGCGCG AAGAACGCAG ACTGGCGCCG GAAAATCTCG ATGACGACGG TCCGTCGGGC TCGCGCCCCG AGGATCAGAC CCAGAGCCAG ACCGACGAAG CCACCTTCGC CAAGCAGCTC AGCCTGCTGA TCAACAAGAT GAAGCTCGCC GGCGAATTCG ACAGTCTGGT GCTGATCGCC GACCCGCAGA CGCTCGGCCA GATGCGGCCG ATCCTGCACA AGACCGTCGA AGCCGCGCTG ATCCGCTCGC TGGCGAAGGA CTACACCAAC AGCTCGTTCG ACGACATCGC CGAGGCGATC GCGGCGTAG
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Protein sequence | MTLIPHNALI VVADGGGAIL LRNTGKPASV VLREERRLAP ENLDDDGPSG SRPEDQTQSQ TDEATFAKQL SLLINKMKLA GEFDSLVLIA DPQTLGQMRP ILHKTVEAAL IRSLAKDYTN SSFDDIAEAI AA
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