Gene RPB_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3343 
Symbol 
ID3911145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3824536 
End bp3824934 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content64% 
IMG OID637885246 
Productputative AtsE 
Protein accessionYP_486950 
Protein GI86750454 
COG category[N] Cell motility 
COG ID[COG5622] Protein required for attachment to host cells 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.578122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0666927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTA TTCCGCACAA CGCACTGATC GTCGTCGCCG ACGGCGGCGG AGCGATTTTG 
CTCCGCAACA CCGGTAAGCC GGCCAGCGTC GTGCTGCGCG AAGAACGCAG ACTGGCGCCG
GAAAATCTCG ATGACGACGG TCCGTCGGGC TCGCGCCCCG AGGATCAGAC CCAGAGCCAG
ACCGACGAAG CCACCTTCGC CAAGCAGCTC AGCCTGCTGA TCAACAAGAT GAAGCTCGCC
GGCGAATTCG ACAGTCTGGT GCTGATCGCC GACCCGCAGA CGCTCGGCCA GATGCGGCCG
ATCCTGCACA AGACCGTCGA AGCCGCGCTG ATCCGCTCGC TGGCGAAGGA CTACACCAAC
AGCTCGTTCG ACGACATCGC CGAGGCGATC GCGGCGTAG
 
Protein sequence
MTLIPHNALI VVADGGGAIL LRNTGKPASV VLREERRLAP ENLDDDGPSG SRPEDQTQSQ 
TDEATFAKQL SLLINKMKLA GEFDSLVLIA DPQTLGQMRP ILHKTVEAAL IRSLAKDYTN
SSFDDIAEAI AA