| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3330 |
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| Symbol | |
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| ID | 3911132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3809433 |
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| End bp | 3811007 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885233 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_486937 |
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| Protein GI | 86750441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.372535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CTCCGAAGTC CGAGCAGGAC CGCGTCATCA TTTTCGACAC CACCTTGCGC
GACGGCGAGC AGTGCCCCGG CGCCACCATG ACGTTCGAGG AGAAGCTGAA CGTCGCCAGG
ATGCTCGACG ACATGGGCGT CGACGTCATC GAGGCCGGTT ATCCGTTTGC TTCCGACGGT
GACTTCGAGG CGGTGCACGA GATCGCCAAG CGCTCGAAGA ATTCGGTGAT CTGCGGATTG
TCGCGCGCGT CGCACAAGGA CATCGACCGC TGCGCCGAGG CGATCAAGCC GGCCGAGCGC
GGCCGCATCC ACACCTTCCT GTCCACCTCG CCGGTGCACA TGAAGTACAA GCTGCAGATG
GAAGCAGCCC AGGTCTACGA GATGGTGATC TCGTCGGTGA CCCGCGCCCG CAACCACACC
GACGACGTCG AGTGGTCGGC CGAGGACGCC ACCCGCACCG AGTTCGATTT CCTGTGCCGC
TGCATTGAGG CCGCGATCAA GGCCGGCGCC ACCACCATCA ACCTGCCGGA CACGGTCGGC
TACGCGGTGC CGGAGGAATA TCGCGAGATG TTCCGCAAGG TGCGCGAGAC GGTGCCGAAT
TCCGACAAGG CGCGGTTCTC GGTGCACTGC CACAACGACC TCGGCATGGC GGTGGCCAAT
TCGATGGCCG GCGTCGCCGG CGGCGCGCGG CAGATCGAGT GCACCATCAA CGGCATCGGC
GAGCGCGCCG GCAACGCCGC GCTGGAAGAA CTGGTGATGG CGATGCGGGT CCGGCAGGAC
AAATTGCCGT ACTGGAACAA CATCGAAACC ACGATGCTGA CCCACGCCTC CAAGACGGTG
TCGGCCGCGA CTTCGTTCCC GGTGCAGTAC AACAAGGCGA TCGTCGGCCG CAACGCGTTC
GCGCACGAGA GCGGCATCCA TCAGGACGGC ATGATCAAGA ATGCCCAGAC CTACGAGATC
ATGACGCCGG AGACGGTCGG CGTGAAGGGC ACCTCGCTGG TGATGGGCAA GCATTCCGGC
CGCGCCGGAC TGATCCACAA GCTGGAAGAG CTGGGCTACA AGCTGTCGCG CAACCAGATC
GAGGACGTGT TCGTGCGGTT CAAGGCTTTG GCCGACCGCA AGAAGGACGT CTACGACGAG
GACATCGAGG CGCTGGTCGA CGAGCAGTTG CTGCACGGCC AGGATCAGAT CAAGCTGAAC
TCGCTGACGG TGATCGCCGG CACCCACGGC CCGCAGCGCG CCACCATGAA GCTCGACGTC
GACGGCCAGA TTAGAATCGA GGAAGCCGAA GGCAACGGCC CGGTCGACGC GGTGTTCAAC
TGCATCAAGG CGCTGGTGCC GCACGACGCC AAGCTGGAGT TGTATCAGGT TCACGCCGTT
ACCGAAGGTA CCGATGCGCA GGCCGAAGTC TCGGTCCGGC TGTCGCACGA GGGCCGCTCG
ATGACCGCGC GCGCCGCCGA TCCGGATACG CTGGTGGCGT CGGCCAAGGC CTATCTGGGC
GCGCTCAACA AGATCGTCGC CAAGCGCCAG CGCGACGTCC GGGAGGCAGT GCCCGCGGTC
GCGGCGGCCG GCTGA
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| Protein sequence | MTTTPKSEQD RVIIFDTTLR DGEQCPGATM TFEEKLNVAR MLDDMGVDVI EAGYPFASDG
DFEAVHEIAK RSKNSVICGL SRASHKDIDR CAEAIKPAER GRIHTFLSTS PVHMKYKLQM
EAAQVYEMVI SSVTRARNHT DDVEWSAEDA TRTEFDFLCR CIEAAIKAGA TTINLPDTVG
YAVPEEYREM FRKVRETVPN SDKARFSVHC HNDLGMAVAN SMAGVAGGAR QIECTINGIG
ERAGNAALEE LVMAMRVRQD KLPYWNNIET TMLTHASKTV SAATSFPVQY NKAIVGRNAF
AHESGIHQDG MIKNAQTYEI MTPETVGVKG TSLVMGKHSG RAGLIHKLEE LGYKLSRNQI
EDVFVRFKAL ADRKKDVYDE DIEALVDEQL LHGQDQIKLN SLTVIAGTHG PQRATMKLDV
DGQIRIEEAE GNGPVDAVFN CIKALVPHDA KLELYQVHAV TEGTDAQAEV SVRLSHEGRS
MTARAADPDT LVASAKAYLG ALNKIVAKRQ RDVREAVPAV AAAG
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