| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3327 |
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| Symbol | |
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| ID | 3911129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3806304 |
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| End bp | 3807596 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637885230 |
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| Product | TRAP dicarboxylate transporter DctM subunit |
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| Protein accession | YP_486934 |
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| Protein GI | 86750438 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.868747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.343483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA TCTTCCTGTT CGCGACGCTG TTCGCGTTGC TCGGCATCGG CATGCCGATC
GCGATGTCGC TCGGCCTGTC GTCGATCCTG ACGATCCTGC TGTTCCAGAA CGACAGCCTG
GCCTCGCTGG TGCTGAAGTT CTTCCAGACC ACCGAGCAGT TCACGCTGCT GGCGATTCCG
TTCTTCATTC TGGCCGGCAA TTTTCTCACC ACCGGTGGCG TCGCCAAGCG GATGATCAAT
TTCGCGATCG CCGCGGTCGG CCATCTGCCG GGCGGCCTCG CGATCGCCTC GGTGCTGGCC
TGCATGCTGT TCGCCGCGGT GTCGGGTTCG TCGCCGGCCA CCGTGGTCGC GATCGGTTCG
ATCGTGATCG CCGGCATGGT CAAGGTCGGT TACACTCAGG CCTTCGCCAC CGGCGTGATC
GTCAATGCCG GCACCCTCGG CATTCTGATC CCGCCTTCGA TCGTCATGGT GGTGTTCGCC
GCGGCCACCG AATCGTCGGT CGGGCGGCTG TTCATCGCCG GCATCATTCC CGGCCTGCTG
CTCGGCCTCG CGCTGATGGT GGCGATCTAT GTCACGGCGC GGATCAAGAA GCTGCCGCGG
CAGCCGAAGG CGTCCTGGGG CGAGCGGCTG TCGCTGTTCG GCCAGGCCTC GTGGGGGCTG
TTGCTGATCC TGATCGTGAT GGGCGGCATC TATGGCGGCA TCTTCACGCC GACCGAGGCG
GCCGCCGTGG CCGCGGTCTA TGCCTTCGTC GCCGCGGTGT TCATCTATCG CGACCTCAAG
ATCGTCGAGG TGCCGCGGGT GCTGCTGGAT TCCGGGCGGG TCTCGGTGAT GCTGATGTTC
ATCATCTGCA ATGCCTTCCT GTTCGCCCAC GTCCTGACCA CGGCGCAGAT TCCGCAGGAC
ATCGCCCGGC TGATCACCGA CGCGCAGTTG CAGCCCTGGC ACTTCCTGCT GATCGTCAAC
ATCATCCTGC TGGTCGCCGG CAATTTCATG GATCCGACCG CGATCGTGCT GATCACCGCG
CCGATCCTGT TCCCGACCGC GATGCAACTC GGCATCGATC CGATTCATCT CGGTATCATC
TATGTGGTGA ACATGGAGAT CGGGCTGGTG ACGCCACCTG TCGGGCTCAA CCTGTTCGTC
GCCTCGGGTA TTACCGGCAT GCCACTCACC AAGGTGGTGC GCGCGGCGGC GCCCTGGCTG
CTGGTGCTGC TCGCTTTCCT GGTTCTCATC ACCTATGTGC CGGTGATCTC CACCTTCCTG
CCCAATCTCG TGTTCGGTCC GGCACTCAAG TAG
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| Protein sequence | MNTIFLFATL FALLGIGMPI AMSLGLSSIL TILLFQNDSL ASLVLKFFQT TEQFTLLAIP
FFILAGNFLT TGGVAKRMIN FAIAAVGHLP GGLAIASVLA CMLFAAVSGS SPATVVAIGS
IVIAGMVKVG YTQAFATGVI VNAGTLGILI PPSIVMVVFA AATESSVGRL FIAGIIPGLL
LGLALMVAIY VTARIKKLPR QPKASWGERL SLFGQASWGL LLILIVMGGI YGGIFTPTEA
AAVAAVYAFV AAVFIYRDLK IVEVPRVLLD SGRVSVMLMF IICNAFLFAH VLTTAQIPQD
IARLITDAQL QPWHFLLIVN IILLVAGNFM DPTAIVLITA PILFPTAMQL GIDPIHLGII
YVVNMEIGLV TPPVGLNLFV ASGITGMPLT KVVRAAAPWL LVLLAFLVLI TYVPVISTFL
PNLVFGPALK
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