Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3318 |
Symbol | |
ID | 3911119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3796263 |
End bp | 3797402 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637885220 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_486925 |
Protein GI | 86750429 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.625003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.154296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTGG TCGTCTTTGA AGACAACGAT GACAAATGGA GCGACATCAA TTCGGTTTTG GTTGAAAAGG GAGTCCGCGC CTCCGGGATC AGACGCGTCG ACAACGTCGC GCAATTTGTG GAGATTTGTC GTGCACAAAT TGACCTCTGC ATCATTGACC TCCTTATGCC CGGAGTTCGT GGCGGTGACT GCCGGAGCGC TGGCGGTGAA CTTCTCCAGA TGCTCGACTT CTCCGGCATG CAGCGGATTC CGGTGCTTGC CATTACTGCA TTTCCGGGAG AAGCGGACCA GCAACGCCAG GCATTCGCCG CCCGAGGATG TATCATCTAT GACTACAACG AGCGTCACGT GTGGTTGCAA GCGCTCGACA TCTTTATCGC GCAGGCCAAA GAGAAGGGTC GATACGAGTT TCTAATCTTC ACATCTATCA AGGCAGAACG CGATGCATAC CTCGCATTGA TGCAATCGCG TGTGGAGAGT ACGCAACGCA TTGGATTGGA TTTGCTGGAA TTTGACATTG ATGGAAGGCC CGGTGCGGCA ATTCTTCTCC CCCGGATGGG CCTAATCAAC GCCGCTGTTA CGGTGGCGCG CGCCCTTGAG TCATATTCCC CAAATGCCGT TGCTATGAGC GGGATCTGCG CTGGTGTTGC TCCAAATGCG ACAATGGGAC AACTTTTGGC AGCCGATGTT GTTTGGGAAT ATCAATCTGG TAAGTGGCTG GACGATGCAT TCGAATCGGA ACCCTATCAA GTGAGTATCC CGCAGGCGAC TCGACTTACA TTGAGCAAGC TCCTTGAGGC TGAGTCGCTA GTTGCCAGGC TTGAACGTAA TTATTCAGGT GACGTTAGAC CCACGCACAT ATCAGCACCA AAATTGGCTC CGTTCGCCAC GGGCTCGGCT GTCATTGCAG ACGGTAGACG GCTGGAGTAC GTCCGAGACC AGCACCGGAA GGTGGCCGGC TTGGACATGG AGGTATTTGG CTTTCATCGC GCCGTTGAGC TGTCCGGTCA GTCCATTCAT TCATTCAGTG CCAAGGTCGT TGTTGATATG GCGGATACTG CAAAGGGAGA TAGTCTCCAC AAATATGGGT GCCACGTGTC CGCTCAGTTC GTCTTGGACG CAATCCGGGC TCTCCGTTAG
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Protein sequence | MRVVVFEDND DKWSDINSVL VEKGVRASGI RRVDNVAQFV EICRAQIDLC IIDLLMPGVR GGDCRSAGGE LLQMLDFSGM QRIPVLAITA FPGEADQQRQ AFAARGCIIY DYNERHVWLQ ALDIFIAQAK EKGRYEFLIF TSIKAERDAY LALMQSRVES TQRIGLDLLE FDIDGRPGAA ILLPRMGLIN AAVTVARALE SYSPNAVAMS GICAGVAPNA TMGQLLAADV VWEYQSGKWL DDAFESEPYQ VSIPQATRLT LSKLLEAESL VARLERNYSG DVRPTHISAP KLAPFATGSA VIADGRRLEY VRDQHRKVAG LDMEVFGFHR AVELSGQSIH SFSAKVVVDM ADTAKGDSLH KYGCHVSAQF VLDAIRALR
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