| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3316 |
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| Symbol | |
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| ID | 3911117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3792806 |
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| End bp | 3795811 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637885218 |
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| Product | hypothetical protein |
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| Protein accession | YP_486923 |
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| Protein GI | 86750427 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.104809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.215386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGCCCC CATTGAAATC CCGAACGCCC TACCGCACAT TCCGCGATAA CTCAAAAGCC
AAGGCCGCCG TTTACAAGGC AATCAGAACG ATTCGCGACC AACGCTCCCG CAACCTAGTA
CGGGGAGCCA TCGCGAGGAA CACCGATTCG TCGCCCTCGC TTTCGATCAA CACTCTCCGT
CGCCAAGCAG ATCCGGGGGA CCTTTGCCTC GCAACAACTC TCCTCCTAGG TCAAAACGGC
CCATTTCCGT TGCCGCAGCT CGGAGGCACC TACCGTAACC TCATTATCAA GCACACGATG
CTGGCGACAG AACCCGACTC CGAGGTCGCT TTTGTTGTCG GTCACGTGAA CGGCTGGGCG
GACAACGCCA GACGCATCCT CGCCGACATG TCGGAACTAG CGCGATTGCC GCAGTACCAA
CCATCCCTTG CAATGGAAGC GCTCGCCGCG TTCGCGGAGT CGTACGGCTC ATCCTTCTAT
ATCCTGCGGA AGACTGCATA CCTAATGTCC CGCTACGCTG ACGACTCAAC ACTCCAGTCA
GCATTCCAAC GGATTGCAAA AGCGTTCAAC CAATCCGCTT ATCCCGAGCC ATACTTTTCT
GCCCTTCAAT TGATGGAAAC CGACTCCAGC TACTGTTCCA CCGCGACCAC CCGCGTCCGC
CTCTTTCAAA AGTATGTTGA AGACGACTAT CGCCAATATC TCCCCTTGAA CGAACTCGTT
CCGACCCCGC TCTCTCGGAC TGATCTTGCC GCGCTTCTTC GTCGCTCCCA CTCAAGTTCT
CTTGTCGATG AACTCGCCGC ACTCGCTATA ACCGCACATC TCAGATCGTT CTGGCCAGCC
TTATTTGACC AGACCATCGC CCTTCTCGAT CCGTCTATTG CACACCTCTT TCTTGAGTTC
TTGTCGATTC CGTTCGACCC ATCCGCTCTG TATTCGGACG TCGCTCGCAT GGACGCGGAC
GTGGTATATT ACCAGCGCGC AGCCGCCTTT TGCGAGTTCA AAGATTGCGC CATCTTCCGT
CGTTCAGTGG ACGCAATTCT TGTACCACGA TTGATGGAAG ACATCTCACC ACCCGTCGAC
ACAGACACCT CGCCGCACTT CCATACCAAG ATGCCAGACC TCATCAAGGC TACACAAGGC
TTCGTTTCTC CCACCGACTA CGAACGAGTA CAGAGCTGCG GGACATTCCT CCGAACCGTG
CAATTCCTAC AGTTCCTGAA CACTCAACGA AACTACTCAC CCCTGTCCGC CCATGACTTC
CGATTCATCT GCGAACATAC CGTCGCCCTC GACATACTAT TGTGCGACTC AGAGATCGAG
ATGCTCTACG CATCATCGGA CGACGACTCA CGCCCACTGA TAACCGTTCT CGCGCTCGCA
CTACATAAAG CAAAAAGTCG CGACGATGAC ATCGATTTCA AATTTCGCCA CTCGCTCTGC
AATACAGTAA TCACTCAATT CAATGGGAGC CTCGAAGCCT TCATTGCTTG GCTACTTCCG
AATACCCCCT CCATTGCCGA CTACCTCCTA ACAATACTCG ACAGACCAAC ACTCCAGAAA
CTCTACTGGA TAGTCAGATC AGCAGACGAA GCGGATCGCA CGAGACAATC GCTACTGCGC
ACCGTCGGAA AACAACGAAA TCAGATCGCA CATCTGATAG AGGCTGACGC AATCGAAGCG
CGGCGCCAAG TCGCAAAACT TCGAAAGTTC TTCGATGACA GCCGCATCTA TGTCGACGGC
CCAGCGATGA AAGAGTGGCT GGTCGCAAAC CCCAGCACCT ACGCTCAACA ATACGTAAAG
ATGATTGAGC ACGAGTTCAG CTCGTTGACA TTCCTGTCAA CATCAACCAG CGGAAAACTA
GTAATCACGG AGTGGAGCGA TCTCGACTAC GTCTTAGTCG AAGCCGGAAA AGCCGCGTTT
GAGCAGTTCT GCACAAACAA GCAGTTCGGG ATTGAGTCGT ACCTTGGTCG GCGCATTCGC
CACAACACTA TGAGCGGGAT GATGCGAGGC GGCATCGACG ACCTAATCGA GTCACCCACT
TATGATTTGC TAACATATGA TAGCGCTTTT GTTGACGCCA ACAAGCGATG GGTTGCTTCT
TATCACCGAA CGATTGAGCA CTTGCGGAAG GATCTACTGC AGTTTCGGTC CGACGCAAAG
CCATTGGGAA TCTTCAACTC AACTCTGAAG CGCGACGACA ATACCAACCT CGCCATCGCA
TCCCTTCGAA ACATGCTATT GAATGGACGC AATCCGTTAT TGATGAACGA CCTGCTTATA
CGCTTCTGCT GGCAAGAGAT TAACCCTCAG CTTCAAACTG CCTCACGCAT GATTTCCATC
GACCTCGTGA AAGAGGCCAC GAGAGAAATC GAACAGCATT TCTTTCATTT CGATTCCGAC
GATCTCCAGC GACGATACCG ACAACAACTC AGAGCGCTAG TCCACGAACG CTTCATGCGA
CTCGGTAGTT GGTTTCGACA ACCCGAGGAT GGCTTTGTGA GCGCACGCAC TCGTCAACTC
TGCGAACTCG TTCTTGTCGA GGCCACAGAT AGTAACTTAT TTGGCACACC AACGGTCGAG
TGGTCCGGTG ACGCTCTCGA CCTGGAAATC GATGGTCTAT CCGTCCACCG AATGTACGAT
TGCCTCTTCG TTATTCTTCA CAATGCGCTT ACTCACGGAC AAGAGAACGG CCTCATAACA
ATTCAGGTCT CACAGGAGGC CATGGCCTTC GAGAGCGTCG GCCACCTCAA GGCCACCGTT
TCCTCTCGTT TCTCCAGCAC AAGCGACAGG TCAAAACACA TAGCGCGATT GGCAGAGAGC
TTCGGATATG GAGATCCAGA GTCAGCCATG GTAACTGAAG GATATTCAGG AATTAAAAAG
CTACGGTATA TAACACGAAC TGGCGACAAC TATTCGAATG CCGGATACAC TATTGATGCC
GACACCTGCT CTGTCTTCTT CACACTTGCG GTCGAATTAG CTGATCTCGA AAGGCCAGAT
GTATGA
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| Protein sequence | MRPPLKSRTP YRTFRDNSKA KAAVYKAIRT IRDQRSRNLV RGAIARNTDS SPSLSINTLR
RQADPGDLCL ATTLLLGQNG PFPLPQLGGT YRNLIIKHTM LATEPDSEVA FVVGHVNGWA
DNARRILADM SELARLPQYQ PSLAMEALAA FAESYGSSFY ILRKTAYLMS RYADDSTLQS
AFQRIAKAFN QSAYPEPYFS ALQLMETDSS YCSTATTRVR LFQKYVEDDY RQYLPLNELV
PTPLSRTDLA ALLRRSHSSS LVDELAALAI TAHLRSFWPA LFDQTIALLD PSIAHLFLEF
LSIPFDPSAL YSDVARMDAD VVYYQRAAAF CEFKDCAIFR RSVDAILVPR LMEDISPPVD
TDTSPHFHTK MPDLIKATQG FVSPTDYERV QSCGTFLRTV QFLQFLNTQR NYSPLSAHDF
RFICEHTVAL DILLCDSEIE MLYASSDDDS RPLITVLALA LHKAKSRDDD IDFKFRHSLC
NTVITQFNGS LEAFIAWLLP NTPSIADYLL TILDRPTLQK LYWIVRSADE ADRTRQSLLR
TVGKQRNQIA HLIEADAIEA RRQVAKLRKF FDDSRIYVDG PAMKEWLVAN PSTYAQQYVK
MIEHEFSSLT FLSTSTSGKL VITEWSDLDY VLVEAGKAAF EQFCTNKQFG IESYLGRRIR
HNTMSGMMRG GIDDLIESPT YDLLTYDSAF VDANKRWVAS YHRTIEHLRK DLLQFRSDAK
PLGIFNSTLK RDDNTNLAIA SLRNMLLNGR NPLLMNDLLI RFCWQEINPQ LQTASRMISI
DLVKEATREI EQHFFHFDSD DLQRRYRQQL RALVHERFMR LGSWFRQPED GFVSARTRQL
CELVLVEATD SNLFGTPTVE WSGDALDLEI DGLSVHRMYD CLFVILHNAL THGQENGLIT
IQVSQEAMAF ESVGHLKATV SSRFSSTSDR SKHIARLAES FGYGDPESAM VTEGYSGIKK
LRYITRTGDN YSNAGYTIDA DTCSVFFTLA VELADLERPD V
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