Gene RPB_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3302 
Symbol 
ID3911103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3773005 
End bp3775098 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content66% 
IMG OID637885204 
Productmolybdopterin oxidoreductase 
Protein accessionYP_486909 
Protein GI86750413 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.785623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA CACGCGCGAA CATCACGATC GGCAGAACGG TTTGTCCGCA CGACTGCCCC 
TCGGCGTGCG CACTCGACGT CGAACTGCTC GATGACGACC GCATCGGGCG CATCCGCGGC
GCCCGCGACA ACTCCTACAC GCTCGGCGTG ATCTGCGAGA AAGTCGCGCG CTACGCCGAG
CGCTTTCATC ATCCAGACCG TCTGCTACAT CCCCTGAAAC GCCGCGGTCC CAAGGGGACC
GGCGATTTCG TACGCATTTC CTGGGAGGAA GCGCTCGATC TCACCGCGAC GGCATTCACG
ACGGCCGAGC GGGACCACGG CGCCGAAAGC GTCTGGCCGT TCTACTTCGC CGGCACGATG
GGCCTCGTCA TGCGCGACGG AATCGAACGG CTGCGCAATG CCAAGGGCTA TTCCGGCATG
TACGCCACCT ATTGCACGCC GTTGTCGTGG GCGGGTTACT ACGCGGGCGT CGGCCGGCTG
ACAGGGGTCG ACCCGCGCGA GATGAGGCAC TCGGACCTGA TCGTGGTCTG GGGCGGCAAT
CCGGTGAACA CGCAGGTCAA CGTGATGACG CATGTGGGCA TCGCCCGCAA GACTCGCGGC
GCCAAGCTCG CCTGCGTCGA CGTCTACGAC ACCGGCACCA TGAAGCAGGC CGATATCAAG
CTGCTGATCC GGCCGGGCAC CGATGGTGCG CTGGCCTGCG CGGTGATGCA CGTACTGTTT
CGCGACGGCT ACGCGGATCG CGAATATCTG CATCGGTACA CCGATTGCCC GGATGCGTTC
GAGCGCCACC TCGACGACAA GACGCCGCAA TGGGCGTCGC GCATCTGCGA TATCCCGGCG
ACCGAGATCG AGGCTTTCGC GGCGCTCATC GGCGCCACAC CCCGCAGCTT CTTCCGGATC
GGTTACGGCT TCACCCGCTC GCGCAACGGT GCCGTGAACA TTCATGCGGT GAGTTCGATT
CCGGCCGTCA CCGGTGCATG GCGCCACCAA GGCGGCGGCG CGCTGCATAC CAACAGCGGC
CTCTACAAAT GGGACAAGAC CTTGATCGAG GGTCGCGACG CCGGCGTCGC GCCGGCCCGG
ATGCTCGATC AATCACGGAT CGGCGCGGTT CTGCTGGGCG ATCCACACGA CCTCCAGGGC
GGCCCGCCGG TCAAGGCGAT GCTGATCCAG AACACCAACC CCGCATCGGT GGCGCCCGAT
CAGACCAGCG TGAAACGCGG ACTGGCGCGT GACGACCTGT TTGTCTGCGT GCACGAACAG
TTCATGACCG AAACCGCGCG CTATGCCGAT GTCGTTTTGC CGGCGACGAT GTTCCTCGAG
CACGACGACG TCTATCAGGG AGGCGGCCAC CAGCACATCC TGCTCGGCCG CCGGCTGGTC
CCGCCAGCCG GCGAGTGCCG CAGCAATCAC GAGGTGATCA GCGCCATCGC CGATCGTGTC
GGCGCGACGC ATCGCGGATT CGCGATGACT CCGCGCGACA TCATCGAGGC GACGCTCGCG
GCGTCACACC GGCCGGGGCT CGATCGGCTG GAGGTCGACG GCTGGCTCGA CGTTCAGACC
GACTTCGCGA CGGCGCACAA CCTCGATGGG TTCGGCCATC CCGACGGCAA GTATCACTTC
AAGCCGGATT GGCAGCAGAC CGCCGCCTAT CTCGGAACCC GCACGCTCGG TCCGTGGGAG
GCCCTGCCCC CGTTTCCGGA TCATTGCTCG CTGATCGAAG ACGCCACCGA CGAATATCCG
TTCCGCCTCG CCACCAGTCC GGCCCGCACC TTCCTCAATT CGACGTTCAA CGAGACGGCA
ACGAGCAAGA CGCGCGAGGG CCGCCCCACC GTGATGGTGC ATCCCGCCGA TCTCACCGCC
CTCGGCCTGA CCTCCGGAGA CAAGGTGAAG CTCGGAAGCG CGCGCGGCGA GGTCACGCTG
CATTGCCGGG CCAACGAGGG CCAGCGCCGC GGCGTGCTGA TCGCCGAATC GATCTGGCCC
AACGACGCCC ACGAGGACGG GTGCGGCATC AACACCCTGA CCGGCGCCGA CCAGTCGGCC
CCGGCCGGCG GCGGCAGTTT CCACGACAAC CGGGTGTGGA TCAGGAAGGC TTGA
 
Protein sequence
MNQTRANITI GRTVCPHDCP SACALDVELL DDDRIGRIRG ARDNSYTLGV ICEKVARYAE 
RFHHPDRLLH PLKRRGPKGT GDFVRISWEE ALDLTATAFT TAERDHGAES VWPFYFAGTM
GLVMRDGIER LRNAKGYSGM YATYCTPLSW AGYYAGVGRL TGVDPREMRH SDLIVVWGGN
PVNTQVNVMT HVGIARKTRG AKLACVDVYD TGTMKQADIK LLIRPGTDGA LACAVMHVLF
RDGYADREYL HRYTDCPDAF ERHLDDKTPQ WASRICDIPA TEIEAFAALI GATPRSFFRI
GYGFTRSRNG AVNIHAVSSI PAVTGAWRHQ GGGALHTNSG LYKWDKTLIE GRDAGVAPAR
MLDQSRIGAV LLGDPHDLQG GPPVKAMLIQ NTNPASVAPD QTSVKRGLAR DDLFVCVHEQ
FMTETARYAD VVLPATMFLE HDDVYQGGGH QHILLGRRLV PPAGECRSNH EVISAIADRV
GATHRGFAMT PRDIIEATLA ASHRPGLDRL EVDGWLDVQT DFATAHNLDG FGHPDGKYHF
KPDWQQTAAY LGTRTLGPWE ALPPFPDHCS LIEDATDEYP FRLATSPART FLNSTFNETA
TSKTREGRPT VMVHPADLTA LGLTSGDKVK LGSARGEVTL HCRANEGQRR GVLIAESIWP
NDAHEDGCGI NTLTGADQSA PAGGGSFHDN RVWIRKA