| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3300 |
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| Symbol | |
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| ID | 3911101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3770209 |
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| End bp | 3771423 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637885202 |
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| Product | Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| Protein accession | YP_486907 |
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| Protein GI | 86750411 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit
[TIGR03136] Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.568287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.687597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAGC AACTCTTCAC GGTCTTTCCC GGCATCGGCA CGATGTTCGT GCAGGAGCCG
TCAATCGCCT TCGCAAGGCT CTTCCTGATC GTCGGCGGAT TCTTTCTCGC CTATCTCGGC
TTCAAGCGCA CGCTGGAGCC GCTGATCATG GTGCCGATGG GCGTTGCGAT GATGTGCGTC
AATGCCGGCG TGATGTTCCT CGAGGGCAAT CACATCGGCA CCCTGATGCT CGATCCGATG
ATCTCGGACC CGATCAAGCT CGTCAACGAG ATGCAGATCT ACTTCCTGCA GCCGGTTTAC
AACTTCGCGT TCTCGAACTC GCTGGTCGCC TGCATGCTGT TCTTCGGCAT CGGCTCGATG
TCGGACATCT CCTTCATTCT CGCCCGTCCC TGGGCGGTGA TCACCTGCGC GATCTTCGCC
GAAATGGGAA CCTTCGCAAC GCTGGTGATC GGCTACTATT GCGGTCTGAC GCCGGGTGAG
GCGGCCGCAG TCGGAACGAT CGGCGGCGCC GACGGCCCGA TGGTGCTGTT CACCTCGCTG
ATGCTGGCCA AGGACCTGTT CGTCCCGATC TCGATCATCG CCTACCTCTA TCTGTCGCTG
ACCTATGCGG GTTATCCGTA TCTGATGAAG CTCCTGGTGC CGAAGAAGTA TCGGGCCATG
GACGTCGAGA TGGAATTCCC GGACGTCTCG CAGAAGGCGA AGTTCGTCTT CACCATCGTC
GCCGCCGCGC TGCTCTGCCT CCTGCTGCCC GTCGCGTCGC CGCTGATCCT GTCGTTCTTC
CTCGGCGTCG CCATCAAGGA AGCCCAGATC GAAGTCTACC AGGATCTGCT CGAGAAGACC
GTCACCTACA TGTCGACGCT GATGCTCGGC CTGGTGCTCG GCGTGCTGTG CGAAGCCTCG
ACGCTGCTCG ACAGCCGCGT GCTGATCCTG CTGGTGCTCG GCATCACCGC GCTGCTGATC
TCCGGTGTCG GTGGTCTGAT CGGCGGCTGG TTCGTCTATC TGATCAGCAA GAAGGCCTTC
AATCCGCTGA TCGGCATCGC CGGCGTGTCC TGCATCCCGA CGACCGCCAA GCTCGCTCAG
AAGATCGCCG CCGAGGACAA TCCCTACGCG ATGATCTTCC CGGTGGCGAT GGGCGCCAAC
ATCTGCGGCG TGATCGTCTC CGCCATCGCG GTCGGCATCT TCGCCTCGAC GATCTCCCTC
GTGGCACCGC ACTGA
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| Protein sequence | MLQQLFTVFP GIGTMFVQEP SIAFARLFLI VGGFFLAYLG FKRTLEPLIM VPMGVAMMCV
NAGVMFLEGN HIGTLMLDPM ISDPIKLVNE MQIYFLQPVY NFAFSNSLVA CMLFFGIGSM
SDISFILARP WAVITCAIFA EMGTFATLVI GYYCGLTPGE AAAVGTIGGA DGPMVLFTSL
MLAKDLFVPI SIIAYLYLSL TYAGYPYLMK LLVPKKYRAM DVEMEFPDVS QKAKFVFTIV
AAALLCLLLP VASPLILSFF LGVAIKEAQI EVYQDLLEKT VTYMSTLMLG LVLGVLCEAS
TLLDSRVLIL LVLGITALLI SGVGGLIGGW FVYLISKKAF NPLIGIAGVS CIPTTAKLAQ
KIAAEDNPYA MIFPVAMGAN ICGVIVSAIA VGIFASTISL VAPH
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